WormBase Tree Display for Gene: WBGene00008970
expand all nodes | collapse all nodes | view schema
| WBGene00008970 | SMap | S_parent | Sequence | F20C5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F20C5.5 | |||||||
| Molecular_name | F20C5.5 | ||||||||
| F20C5.5.1 | |||||||||
| CE44438 | |||||||||
| Other_name | CELE_F20C5.5 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | F20C5.5 | ||||||||
| DB_info | Database | AceView | gene | 4J532 | |||||
| WormQTL | gene | WBGene00008970 | |||||||
| WormFlux | gene | WBGene00008970 | |||||||
| NDB | locus_tag | CELE_F20C5.5 | |||||||
| NCBI | gene | 177686 | |||||||
| RefSeq | protein | NM_001380382.1 | |||||||
| TrEMBL | UniProtAcc | Q19636 | |||||||
| UniProt_GCRP | UniProtAcc | Q19636 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (32) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP4308 | ||||||||
| Ortholog | chrIV_pilon.g11156 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Enriched in ABalaapppa; ABalapaapa; ABprpapppa; neurons; and somatic gonad precursor based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and rrf-3 based on microarray; RNA-seq; and proteomic studies. Is affected by nine chemicals including Tunicamycin; Psoralens; and allantoin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F20C5.5 | |||||||
| Corresponding_CDS_history | F20C5.5:wp161 | ||||||||
| F20C5.5:wp210 | |||||||||
| Corresponding_transcript | F20C5.5.1 | ||||||||
| Associated_feature | WBsf997273 | ||||||||
| WBsf997274 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00031163 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00045090 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013608 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00097999 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013599 | ||||||||
| Expr1033903 | |||||||||
| Expr1149039 | |||||||||
| Expr2002776 | |||||||||
| Expr2020994 | |||||||||
| Drives_construct | WBCnstr00032558 | ||||||||
| Construct_product | WBCnstr00032558 | ||||||||
| Microarray_results (12) | |||||||||
| Expression_cluster (97) | |||||||||
| Interaction | WBInteraction000330410 | ||||||||
| WBInteraction000573659 | |||||||||
| WBInteraction000574434 | |||||||||
| Map_info | Positive | Positive_clone | F20C5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 3.96131 | |||||||
| Method | Gene |
