WormBase Tree Display for Gene: WBGene00008915
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WBGene00008915 | SMap | S_parent | Sequence | F17C11 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name (4) | |||||||||
DB_info | Database | AceView | gene | 5L433 | |||||
WormQTL | gene | WBGene00008915 | |||||||
WormFlux | gene | WBGene00008915 | |||||||
NDB | locus_tag | CELE_F17C11.4 | |||||||
NCBI | gene | 179518 | |||||||
RefSeq | protein | NM_001307764.3 | |||||||
NM_001392605.1 | |||||||||
TrEMBL | UniProtAcc | N1NVB6 | |||||||
Q19515 | |||||||||
UniProt_GCRP | UniProtAcc | N1NVB6 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (19) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (21) | |||||||||
Structured_description | Automated_description | Enriched in several structures, including GLR; MSpppaaa; coelomocyte; head mesodermal cell; and neurons based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; skn-1; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by fourteen chemicals including D-glucose; tert-Butylhydroperoxide; and Psoralens based on RNA-seq; proteomic; and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS (2) | ||||||||
Corresponding_transcript | F17C11.4a.1 | ||||||||
F17C11.4b.1 | |||||||||
Other_sequence (11) | |||||||||
Associated_feature | WBsf647218 | ||||||||
WBsf661670 | |||||||||
WBsf981996 | |||||||||
WBsf232441 | |||||||||
Experimental_info | RNAi_result | WBRNAi00044876 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00031066 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1026335 | ||||||||
Expr1033879 | |||||||||
Expr1148842 | |||||||||
Expr2002688 | |||||||||
Expr2020904 | |||||||||
Drives_construct | WBCnstr00032598 | ||||||||
Construct_product | WBCnstr00032598 | ||||||||
Microarray_results (21) | |||||||||
Expression_cluster (177) | |||||||||
SAGE_tag | SAGE:aaatgcagac | Strand | Antisense | ||||||
SAGE:aaagcagcag | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:tgactggtgt | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:tgactggtgtcaaggtt | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:aaagcagcagtcgaaat | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
Interaction (95) | |||||||||
Map_info | Positive | Positive_clone | F17C11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | 2.8389 | |||||||
Method | Gene |