WormBase Tree Display for Gene: WBGene00008880
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| WBGene00008880 | SMap | S_parent | Sequence | F16B12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F16B12.4 | |||||||
| Molecular_name | F16B12.4 | ||||||||
| F16B12.4.1 | |||||||||
| CE34173 | |||||||||
| Other_name | CELE_F16B12.4 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | F16B12.4 | ||||||||
| DB_info | Database | AceView | gene | XO712 | |||||
| WormQTL | gene | WBGene00008880 | |||||||
| WormFlux | gene | WBGene00008880 | |||||||
| NDB | locus_tag | CELE_F16B12.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008880|UniProtKB=Q93517 | |||||||
| family | PTHR38620 | ||||||||
| NCBI | gene | 184564 | |||||||
| RefSeq | protein | NM_077946.5 | |||||||
| TREEFAM | TREEFAM_ID | TF322281 | |||||||
| TrEMBL | UniProtAcc | Q93517 | |||||||
| UniProt_GCRP | UniProtAcc | Q93517 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (51) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (13) | |||||||||
| Paralog | WBGene00019244 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020183 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including Z1.p; coelomocyte; intestine; male distal tip cell; and neurons based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-2; daf-12; and hsf-1 based on microarray; tiling array; RNA-seq; and proteomic studies. Is affected by eight chemicals including 1-methylnicotinamide; Alovudine; and stavudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F16B12.4 | |||||||
| Corresponding_CDS_history | F16B12.4:wp102 | ||||||||
| Corresponding_transcript | F16B12.4.1 | ||||||||
| Associated_feature | WBsf654555 | ||||||||
| WBsf671234 | |||||||||
| WBsf671235 | |||||||||
| WBsf1007826 | |||||||||
| WBsf238194 | |||||||||
| WBsf238195 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00031022 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00013401 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044776 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023293 | ||||||||
| Expr1033872 | |||||||||
| Expr1148741 | |||||||||
| Expr2002642 | |||||||||
| Expr2020859 | |||||||||
| Drives_construct | WBCnstr00032619 | ||||||||
| Construct_product | WBCnstr00032619 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (101) | |||||||||
| Interaction | WBInteraction000360984 | ||||||||
| WBInteraction000574956 | |||||||||
| Map_info | Positive | Positive_clone | F16B12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 16.4605 | |||||||
| Method | Gene |
