WormBase Tree Display for Gene: WBGene00008852
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| WBGene00008852 | SMap | S_parent | Sequence | CHROMOSOME_I | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ubql-1 | Person_evidence | WBPerson260 | |||||
| Sequence_name | F15C11.2 | ||||||||
| Molecular_name | F15C11.2a | ||||||||
| F15C11.2a.1 | |||||||||
| CE09413 | |||||||||
| F15C11.2b | |||||||||
| CE31479 | |||||||||
| F15C11.2c | |||||||||
| CE31480 | |||||||||
| F15C11.2b.1 | |||||||||
| F15C11.2c.1 | |||||||||
| Other_name | CELE_F15C11.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | ubql-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 06 Jan 2012 13:49:20 | WBPerson2970 | Name_change | CGC_name | ubql-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ubql | ||||||||
| Allele (73) | |||||||||
| Strain | WBStrain00001458 | ||||||||
| WBStrain00031757 | |||||||||
| WBStrain00054751 | |||||||||
| Component_of_genotype | WBGenotype00000085 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (47) | |||||||||
| Paralog | WBGene00009878 | Caenorhabditis elegans | From_analysis | Panther | |||||
| Structured_description | Automated_description | Predicted to enable polyubiquitin modification-dependent protein binding activity. Involved in negative regulation of double-strand break repair via homologous recombination; protein export from nucleus; and response to endoplasmic reticulum stress. Predicted to be located in cytosol. Human ortholog(s) of this gene implicated in amyotrophic lateral sclerosis type 15. Is an ortholog of human UBQLN1 (ubiquilin 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Experimental_model | DOID:332 | Homo sapiens | Paper_evidence | WBPaper00066343 | ||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 31 Aug 2021 00:00:00 | ||||||||
| Potential_model | DOID:0060206 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12509) | |||||
| DOID:332 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12509) | ||||||
| Models_disease_asserted | WBDOannot00001042 | ||||||||
| Molecular_info | Corresponding_CDS | F15C11.2a | |||||||
| F15C11.2b | |||||||||
| F15C11.2c | |||||||||
| Corresponding_CDS_history | F15C11.2:wp82 | ||||||||
| Corresponding_transcript | F15C11.2a.1 | ||||||||
| F15C11.2b.1 | |||||||||
| F15C11.2c.1 | |||||||||
| Other_sequence (38) | |||||||||
| Associated_feature (32) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00000939 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00044704 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00078069 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00093225 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00093227 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013364 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00116514 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076304 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030997 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr5767 | ||||||||
| Expr1023046 | |||||||||
| Expr1033857 | |||||||||
| Expr1148678 | |||||||||
| Expr2017726 | |||||||||
| Expr2035864 | |||||||||
| Drives_construct | WBCnstr00002336 | ||||||||
| WBCnstr00032633 | |||||||||
| Construct_product | WBCnstr00032633 | ||||||||
| Microarray_results (38) | |||||||||
| Expression_cluster (115) | |||||||||
| Interaction (125) | |||||||||
| WBProcess | WBbiopr:00000076 | ||||||||
| Map_info | Map | I | Position | 1.65379 | |||||
| Positive | Positive_clone | F15C11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027083 | ||||||||
| WBPaper00035294 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056116 | |||||||||
| WBPaper00059412 | |||||||||
| WBPaper00065275 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
