WormBase Tree Display for Gene: WBGene00008838
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| WBGene00008838 | SMap | S_parent | Sequence | F15A4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F15A4.2 | |||||||
| Molecular_name | F15A4.2 | ||||||||
| F15A4.2.1 | |||||||||
| CE15839 | |||||||||
| Other_name | CELE_F15A4.2 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | F15A4.2 | ||||||||
| DB_info | Database | AceView | gene | 2M755 | |||||
| WormQTL | gene | WBGene00008838 | |||||||
| WormFlux | gene | WBGene00008838 | |||||||
| NDB | locus_tag | CELE_F15A4.2 | |||||||
| NCBI | gene | 184511 | |||||||
| RefSeq | protein | NM_064253.5 | |||||||
| TREEFAM | TREEFAM_ID | TF322394 | |||||||
| TrEMBL | UniProtAcc | O17817 | |||||||
| UniProt_GCRP | UniProtAcc | O17817 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (51) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrII_pilon.g6174 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Paralog (11) | |||||||||
| Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. | Paper_evidence | WBPaper00012854 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in several structures, including ABalaaaala; ABalaapaaa; RMED; amphid neurons; and germ line based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and hsf-1 based on microarray; tiling array; and RNA-seq studies. Is affected by fifteen chemicals including hydrogen sulfide; mianserin; and multi-walled carbon nanotube based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain and F-box associated. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F15A4.2 | |||||||
| Corresponding_transcript | F15A4.2.1 | ||||||||
| Associated_feature | WBsf644755 | ||||||||
| WBsf222269 | |||||||||
| WBsf222270 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00061623 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00030984 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013341 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044678 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021838 | ||||||||
| Expr1033852 | |||||||||
| Expr1148651 | |||||||||
| Expr2002606 | |||||||||
| Expr2020823 | |||||||||
| Drives_construct | WBCnstr00032644 | ||||||||
| Construct_product | WBCnstr00032644 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (177) | |||||||||
| Interaction (47) | |||||||||
| Map_info | Positive | Positive_clone | F15A4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 10.0473 | |||||||
| Reference | WBPaper00012854 | ||||||||
| Method | Gene |
