WormBase Tree Display for Gene: WBGene00008611
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WBGene00008611 | SMap | S_parent | Sequence | F09C3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | fbxb-68 | Person_evidence | WBPerson655 | |||||
Sequence_name | F09C3.3 | ||||||||
Molecular_name | F09C3.3 | ||||||||
F09C3.3.1 | |||||||||
CE42904 | |||||||||
Other_name | CELE_F09C3.3 | Accession_evidence | NDB | BX284601 | |||||
Public_name | fbxb-68 | ||||||||
DB_info | Database | AceView | gene | 1O874 | |||||
WormQTL | gene | WBGene00008611 | |||||||
WormFlux | gene | WBGene00008611 | |||||||
NDB | locus_tag | CELE_F09C3.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00008611|UniProtKB=O17774 | |||||||
family | PTHR22899 | ||||||||
NCBI | gene | 184227 | |||||||
RefSeq | protein | NM_061094.4 | |||||||
TrEMBL | UniProtAcc | O17774 | |||||||
UniProt_GCRP | UniProtAcc | O17774 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 12 Dec 2005 17:22:20 | WBPerson2970 | Name_change | CGC_name | fbxb-68 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | fbxb | ||||||||
Allele (30) | |||||||||
Strain | WBStrain00036288 | ||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (13) | |||||||||
Paralog (142) | |||||||||
Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; its encoded protein also contains a Pfam-B45 motif of presently unknown function. | Paper_evidence | WBPaper00012854 | |||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Enriched in arcade cell based on single-cell RNA-seq studies. Is affected by several genes including daf-2; eat-2; and lin-35 based on microarray; tiling array; and RNA-seq studies. Is affected by twelve chemicals including Alovudine; stavudine; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box domain; F-box associated; and F-box associated domain, type 2. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F09C3.3 | |||||||
Corresponding_CDS_history | F09C3.3:wp193 | ||||||||
Corresponding_transcript | F09C3.3.1 | ||||||||
Associated_feature | WBsf649752 | ||||||||
Experimental_info | RNAi_result | WBRNAi00003347 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00044090 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1012332 | ||||||||
Expr1033753 | |||||||||
Expr1148058 | |||||||||
Expr2011669 | |||||||||
Expr2029908 | |||||||||
Microarray_results (11) | |||||||||
Expression_cluster (76) | |||||||||
Interaction (37) | |||||||||
Map_info | Map | I | Position | 24.226 | Error | 0.017266 | |||
Positive | Positive_clone | F09C3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00012854 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |