WormBase Tree Display for Gene: WBGene00008483
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| WBGene00008483 | SMap | S_parent | Sequence | CHROMOSOME_II | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | E04D5.4 | |||||||
| Molecular_name | E04D5.4a | ||||||||
| E04D5.4a.1 | |||||||||
| CE37893 | |||||||||
| E04D5.4b | |||||||||
| CE43354 | |||||||||
| E04D5.4b.1 | |||||||||
| Other_name | CELE_E04D5.4 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | E04D5.4 | ||||||||
| DB_info | Database | AceView | gene | 2K731 | |||||
| WormQTL | gene | WBGene00008483 | |||||||
| WormFlux | gene | WBGene00008483 | |||||||
| NDB | locus_tag | CELE_E04D5.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008483|UniProtKB=G5ECJ2 | |||||||
| family | PTHR21724 | ||||||||
| NCBI | gene | 184038 | |||||||
| RefSeq | protein | NM_001267318.3 | |||||||
| NM_001267317.2 | |||||||||
| TREEFAM | TREEFAM_ID | TF318899 | |||||||
| TrEMBL | UniProtAcc | G5EEJ8 | |||||||
| G5ECJ2 | |||||||||
| UniProt_GCRP | UniProtAcc | G5ECJ2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (60) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (21) | |||||||||
| Paralog (61) | |||||||||
| Structured_description | Automated_description | Enriched in intestine and neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on tiling array; microarray; and RNA-seq studies. Is affected by twenty-four chemicals including 1-methylnicotinamide; Tunicamycin; and mianserin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: ShK domain-like and ShKT domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | E04D5.4a | |||||||
| E04D5.4b | |||||||||
| Corresponding_CDS_history | E04D5.4:wp111 | ||||||||
| E04D5.4:wp137 | |||||||||
| E04D5.4:wp197 | |||||||||
| Corresponding_transcript | E04D5.4a.1 | ||||||||
| E04D5.4b.1 | |||||||||
| Associated_feature | WBsf222012 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00030498 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00092964 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043672 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012685 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026672 | ||||||||
| Expr1147656 | |||||||||
| Expr2002155 | |||||||||
| Expr2020375 | |||||||||
| Drives_construct | WBCnstr00032935 | ||||||||
| Construct_product | WBCnstr00032935 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (173) | |||||||||
| Interaction (16) | |||||||||
| Map_info | Positive | Positive_clone | E04D5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 2.57067 | |||||||
| Method | Gene |
