WormBase Tree Display for Gene: WBGene00008439
expand all nodes | collapse all nodes | view schema
| WBGene00008439 | SMap | S_parent | Sequence | DY3 | |||
|---|---|---|---|---|---|---|---|
| Identity (6) | |||||||
| Gene_info | Biotype | SO:0001217 | |||||
| Gene_class | mfb | ||||||
| Allele (70) | |||||||
| Strain | WBStrain00002459 | ||||||
| WBStrain00002900 | |||||||
| WBStrain00035998 | |||||||
| RNASeq_FPKM (74) | |||||||
| GO_annotation (6) | |||||||
| Ortholog (40) | |||||||
| Structured_description | Automated_description | Predicted to be involved in protein ubiquitination. Predicted to be located in cytoplasm and nucleus. Predicted to be part of SCF ubiquitin ligase complex. Expressed in several structures, including head; hypodermal cell; tail; touch receptor neurons; and ventral nerve cord. Human ortholog(s) of this gene implicated in primary pulmonary hypertension. Is an ortholog of human FBXO25 (F-box protein 25) and FBXO32 (F-box protein 32). | Paper_evidence | WBPaper00065943 | |||
| Curator_confirmed | WBPerson324 | ||||||
| WBPerson37462 | |||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
| Disease_info | Potential_model | DOID:14557 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:16731) | ||
| Molecular_info | Corresponding_CDS | DY3.6 | |||||
| Corresponding_transcript | DY3.6.1 | ||||||
| Other_sequence (99) | |||||||
| Associated_feature | WBsf649419 | ||||||
| WBsf984505 | |||||||
| WBsf984506 | |||||||
| WBsf1010275 | |||||||
| WBsf219983 | |||||||
| Experimental_info | RNAi_result (9) | ||||||
| Expr_pattern (12) | |||||||
| Drives_construct | WBCnstr00003056 | ||||||
| WBCnstr00004524 | |||||||
| WBCnstr00011153 | |||||||
| WBCnstr00020326 | |||||||
| Construct_product | WBCnstr00011153 | ||||||
| Microarray_results (18) | |||||||
| Expression_cluster (239) | |||||||
| Interaction (18) | |||||||
| Map_info | Map | I | Position | 3.11369 | Error | 0.005753 | |
| Positive | Positive_clone | DY3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
| Mapping_data | Multi_point | 4889 | |||||
| 4741 | |||||||
| Pseudo_map_position | |||||||
| Reference | WBPaper00012854 | ||||||
| WBPaper00024548 | |||||||
| WBPaper00038491 | |||||||
| WBPaper00043086 | |||||||
| WBPaper00046423 | |||||||
| WBPaper00055090 | |||||||
| WBPaper00064339 | |||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
| Method | Gene |
