WormBase Tree Display for Gene: WBGene00008356
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WBGene00008356 | SMap | S_parent | Sequence | D1025 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | nspc-20 | Person_evidence | WBPerson655 | |||||
Sequence_name | D1025.4 | ||||||||
Molecular_name | D1025.4 | ||||||||
D1025.4.1 | |||||||||
CE17612 | |||||||||
Other_name | CELE_D1025.4 | Accession_evidence | NDB | BX284606 | |||||
Public_name | nspc-20 | ||||||||
DB_info | Database | AceView | gene | XP148 | |||||
WormQTL | gene | WBGene00008356 | |||||||
WormFlux | gene | WBGene00008356 | |||||||
NDB | locus_tag | CELE_D1025.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00008356|UniProtKB=G5ECP8 | |||||||
family | PTHR31330 | ||||||||
NCBI | gene | 181549 | |||||||
RefSeq | protein | NM_078016.7 | |||||||
TREEFAM | TREEFAM_ID | TF318876 | |||||||
TrEMBL | UniProtAcc | G5ECP8 | |||||||
UniProt_GCRP | UniProtAcc | G5ECP8 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 18 May 2005 14:07:22 | WBPerson2970 | Name_change | CGC_name | nspc-20 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | nspc | ||||||||
Allele (29) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (260) | |||||||||
Paralog (17) | |||||||||
Structured_description | Automated_description | Enriched in excretory gland cell and intestine based on single-cell RNA-seq and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by fifteen chemicals including hydrogen sulfide; mianserin; and D-glucose based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info (3) | |||||||||
Experimental_info | RNAi_result (4) | ||||||||
Expr_pattern | Expr1025177 | ||||||||
Expr1147342 | |||||||||
Expr2014471 | |||||||||
Expr2032711 | |||||||||
Drives_construct | WBCnstr00033032 | ||||||||
Construct_product | WBCnstr00033032 | ||||||||
Microarray_results | SMD_D1025.4 | ||||||||
A_12_P133345 | |||||||||
Aff_D1025.4 | |||||||||
GPL8304_CE_WBGene00008356_A | |||||||||
Expression_cluster (167) | |||||||||
Interaction (196) | |||||||||
Map_info | Map | X | Position | 16.7321 | |||||
Positive | Positive_clone | D1025 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00064841 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |