WormBase Tree Display for Gene: WBGene00008344
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WBGene00008344 | SMap | S_parent | Sequence | C56A3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | C56A3.5 | |||||||
Molecular_name | C56A3.5 | ||||||||
C56A3.5.1 | |||||||||
CE09033 | |||||||||
Other_name | CELE_C56A3.5 | Accession_evidence | NDB | BX284605 | |||||
Public_name | C56A3.5 | ||||||||
DB_info | Database | AceView | gene | 5O31 | |||||
WormQTL | gene | WBGene00008344 | |||||||
WormFlux | gene | WBGene00008344 | |||||||
NDB | locus_tag | CELE_C56A3.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00008344|UniProtKB=Q18877 | |||||||
family | PTHR37968 | ||||||||
NCBI | gene | 183857 | |||||||
RefSeq | protein | NM_073954.9 | |||||||
TREEFAM | TREEFAM_ID | TF314712 | |||||||
TrEMBL | UniProtAcc | Q18877 | |||||||
UniProt_GCRP | UniProtAcc | Q18877 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (32) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (27) | |||||||||
Paralog | WBGene00017264 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
WBGene00017214 | |||||||||
Structured_description | Automated_description | Enriched in body wall muscle cell; germ line; and oocyte based on tiling array and RNA-seq studies. Is affected by several genes including nuo-6; etr-1; and mrg-1 based on microarray and RNA-seq studies. Is affected by seven chemicals including Zidovudine; rifampin; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Leucine-rich repeat domain superfamily. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info (4) | |||||||||
Experimental_info | RNAi_result | WBRNAi00043255 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00007775 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00077822 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00012450 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00030192 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1025196 | ||||||||
Expr1033614 | |||||||||
Expr1147235 | |||||||||
Expr2001969 | |||||||||
Expr2020193 | |||||||||
Drives_construct | WBCnstr00033038 | ||||||||
Construct_product | WBCnstr00033038 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (92) | |||||||||
Interaction (15) | |||||||||
Map_info | Positive | Positive_clone | C56A3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | 5.44556 | |||||||
Method | Gene |