WormBase Tree Display for Gene: WBGene00008341
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WBGene00008341 | SMap | S_parent | Sequence | C56A3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | ttr-44 | |||||||
Sequence_name | C56A3.2 | ||||||||
Molecular_name | C56A3.2a | ||||||||
C56A3.2a.1 | |||||||||
CE09030 | |||||||||
C56A3.2b | |||||||||
CE45479 | |||||||||
C56A3.2b.1 | |||||||||
Other_name | CELE_C56A3.2 | Accession_evidence | NDB | BX284605 | |||||
Public_name | ttr-44 | ||||||||
DB_info | Database | AceView | gene | 5O10 | |||||
WormQTL | gene | WBGene00008341 | |||||||
WormFlux | gene | WBGene00008341 | |||||||
NDB | locus_tag | CELE_C56A3.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00008341|UniProtKB=Q18878 | |||||||
family | PTHR21700 | ||||||||
NCBI | gene | 179835 | |||||||
RefSeq | protein | NM_001269585.3 | |||||||
NM_001380804.1 | |||||||||
TREEFAM | TREEFAM_ID | TF315773 | |||||||
TrEMBL | UniProtAcc | Q18878 | |||||||
E3W741 | |||||||||
UniProt_GCRP | UniProtAcc | Q18878 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 20 Sep 2007 11:48:01 | WBPerson2970 | Name_change | CGC_name | ttr-44 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ttr | ||||||||
Allele (29) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00008201 | ||||||||
00116266 | |||||||||
Ortholog (30) | |||||||||
Paralog (62) | |||||||||
Structured_description | Automated_description | Predicted to be located in cell surface and extracellular region. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C56A3.2a | |||||||
C56A3.2b | |||||||||
Corresponding_transcript | C56A3.2a.1 | ||||||||
C56A3.2b.1 | |||||||||
Other_sequence (165) | |||||||||
Associated_feature | WBsf653319 | ||||||||
WBsf234821 | |||||||||
WBsf234822 | |||||||||
Experimental_info | RNAi_result | WBRNAi00012448 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00043252 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00030190 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1010927 | ||||||||
Expr1147232 | |||||||||
Expr2017611 | |||||||||
Expr2035749 | |||||||||
Microarray_results (17) | |||||||||
Expression_cluster (317) | |||||||||
Map_info | Map | V | Position | 5.42318 | Error | 0.012715 | |||
Positive | Positive_clone | C56A3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00064229 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |