WormBase Tree Display for Gene: WBGene00008279
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WBGene00008279 | SMap | S_parent | Sequence | C53C7 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | C53C7.3 | |||||||
Molecular_name | C53C7.3 | ||||||||
C53C7.3.1 | |||||||||
CE34167 | |||||||||
Other_name | CELE_C53C7.3 | Accession_evidence | NDB | BX284606 | |||||
Public_name | C53C7.3 | ||||||||
DB_info | Database | AceView | gene | XN667 | |||||
WormQTL | gene | WBGene00008279 | |||||||
WormFlux | gene | WBGene00008279 | |||||||
NDB | locus_tag | CELE_C53C7.3 | |||||||
NCBI | gene | 183748 | |||||||
RefSeq | protein | NM_077764.2 | |||||||
TrEMBL | UniProtAcc | Q9XXU2 | |||||||
UniProt_GCRP | UniProtAcc | Q9XXU2 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (45) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00104683 | ||||||||
00104684 | |||||||||
Ortholog | chrX_pilon.g20340 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
Paralog | WBGene00010519 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
Structured_description | Automated_description | Enriched in ABplpaapap; ABprpaapap; and neurons based on single-cell RNA-seq and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and sir-2.1 based on microarray; tiling array; and RNA-seq studies. Is affected by five chemicals including Psoralens; allantoin; and metformin based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C53C7.3 | |||||||
Corresponding_CDS_history | C53C7.3:wp102 | ||||||||
Corresponding_transcript | C53C7.3.1 | ||||||||
Associated_feature | WBsf1007508 | ||||||||
WBsf1007509 | |||||||||
WBsf1007510 | |||||||||
WBsf1024172 | |||||||||
WBsf1024173 | |||||||||
Experimental_info | RNAi_result | WBRNAi00012359 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00043088 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00030112 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1022594 | ||||||||
Expr1033595 | |||||||||
Expr1147053 | |||||||||
Expr2001890 | |||||||||
Expr2020115 | |||||||||
Drives_construct | WBCnstr00033089 | ||||||||
Construct_product | WBCnstr00033089 | ||||||||
Microarray_results (14) | |||||||||
Expression_cluster (57) | |||||||||
Interaction | WBInteraction000030505 | ||||||||
WBInteraction000269151 | |||||||||
WBInteraction000384138 | |||||||||
WBInteraction000508619 | |||||||||
WBInteraction000508674 | |||||||||
WBInteraction000508715 | |||||||||
WBInteraction000547531 | |||||||||
WBInteraction000547587 | |||||||||
WBInteraction000547588 | |||||||||
WBInteraction000550824 | |||||||||
Map_info | Positive | Positive_clone | C53C7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | X | 9.77127 | |||||||
Method | Gene |