WormBase Tree Display for Gene: WBGene00008272
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| WBGene00008272 | SMap | S_parent | Sequence | C53B4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C53B4.2 | |||||||
| Molecular_name | C53B4.2 | ||||||||
| C53B4.2.1 | |||||||||
| CE52824 | |||||||||
| Other_name | CELE_C53B4.2 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | C53B4.2 | ||||||||
| DB_info | Database | AceView | gene | 4J733 | |||||
| WormQTL | gene | WBGene00008272 | |||||||
| WormFlux | gene | WBGene00008272 | |||||||
| NDB | locus_tag | CELE_C53B4.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008272|UniProtKB=Q18796 | |||||||
| family | PTHR21592 | ||||||||
| NCBI | gene | 353430 | |||||||
| RefSeq | protein | NM_069154.5 | |||||||
| TREEFAM | TREEFAM_ID | TF318864 | |||||||
| TrEMBL | UniProtAcc | Q18796 | |||||||
| UniProt_GCRP | UniProtAcc | Q18796 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (29) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (18) | |||||||||
| Paralog (20) | |||||||||
| Structured_description | Automated_description | Enriched in AFD; AVK; coelomocyte; and in male based on tiling array and RNA-seq studies. Is affected by several genes including skn-1; age-1; and hsf-1 based on microarray; tiling array; RNA-seq; and proteomic studies. Is affected by sixteen chemicals including methylmercuric chloride; Tunicamycin; and manganese chloride based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Protein of unknown function (DUF851); Phosphorylation site; and Protein of unknown function DUF851. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C53B4.2 | |||||||
| Corresponding_CDS_history | C53B4.2:wp92 | ||||||||
| C53B4.2:wp234 | |||||||||
| C53B4.2:wp268 | |||||||||
| Corresponding_transcript | C53B4.2.1 | ||||||||
| Other_sequence (14) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00043068 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00012341 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028166 | ||||||||
| Expr1147033 | |||||||||
| Expr2001882 | |||||||||
| Expr2020108 | |||||||||
| Drives_construct | WBCnstr00033095 | ||||||||
| Construct_product | WBCnstr00033095 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (116) | |||||||||
| Interaction (12) | |||||||||
| Map_info | Positive | Positive_clone | C53B4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 3.9999 | |||||||
| Method | Gene |
