WormBase Tree Display for Gene: WBGene00008267
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| WBGene00008267 | SMap | S_parent | Sequence | C53A5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C53A5.9 | |||||||
| Molecular_name | C53A5.9 | ||||||||
| C53A5.9.1 | |||||||||
| CE47626 | |||||||||
| Other_name | CELE_C53A5.9 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | C53A5.9 | ||||||||
| DB_info | Database | AceView | gene | 5P36 | |||||
| WormQTL | gene | WBGene00008267 | |||||||
| WormFlux | gene | WBGene00008267 | |||||||
| NDB | locus_tag | CELE_C53A5.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008267|UniProtKB=O17700 | |||||||
| family | PTHR24412 | ||||||||
| NCBI | gene | 183739 | |||||||
| RefSeq | protein | NM_074204.5 | |||||||
| TREEFAM | TREEFAM_ID | TF351241 | |||||||
| TrEMBL | UniProtAcc | O17700 | |||||||
| UniProt_GCRP | UniProtAcc | O17700 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (104) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (35) | |||||||||
| Paralog (15) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalpapaap; ABarappaap; intestine; neurons; and retrovesicular ganglion based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including skn-1; rrf-3; and eat-2 based on microarray; tiling array; and RNA-seq studies. Is affected by fifteen chemicals including methylmercuric chloride; Mercuric Chloride; and allantoin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Kelch motif; Kelch repeat type 1; and Kelch-type beta propeller. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C53A5.9 | |||||||
| Corresponding_CDS_history | C53A5.9:wp231 | ||||||||
| Corresponding_transcript | C53A5.9.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00043066 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00012339 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022182 | ||||||||
| Expr1147031 | |||||||||
| Expr2001880 | |||||||||
| Expr2020106 | |||||||||
| Drives_construct | WBCnstr00033100 | ||||||||
| Construct_product | WBCnstr00033100 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (191) | |||||||||
| Map_info | Positive | Positive_clone | C53A5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 6.48454 | |||||||
| Reference | WBPaper00055090 | ||||||||
| Method | Gene |
