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WormBase Tree Display for Gene: WBGene00008244

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Name Class

WBGene00008244SMapS_parentSequenceC50H2
IdentityVersion2
NameCGC_namefipr-11Person_evidenceWBPerson168
Sequence_nameC50H2.10
Molecular_nameC50H2.10
C50H2.10.1
CE30127
Other_nameCELE_C50H2.10Accession_evidenceNDBBX284605
Public_namefipr-11
DB_infoDatabaseAceViewgene5K382
WormQTLgeneWBGene00008244
WormFluxgeneWBGene00008244
NDBlocus_tagCELE_C50H2.10
PanthergeneCAEEL|WormBase=WBGene00008244|UniProtKB=Q8WQG0
familyPTHR22552
NCBIgene260084
RefSeqproteinNM_171520.3
TrEMBLUniProtAccQ8WQG0
UniProt_GCRPUniProtAccQ8WQG0
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
203 Apr 2007 10:48:52WBPerson2970Name_changeCGC_namefipr-11
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfipr
Allele (20)
RNASeq_FPKM (74)
Ortholog (69)
Paralog (17)
Structured_descriptionAutomated_descriptionEnriched in germ line based on RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by eleven chemicals including aldicarb; D-glucose; and Psoralens based on microarray and RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC50H2.10
Corresponding_transcriptC50H2.10.1
Associated_featureWBsf234296
Experimental_infoRNAi_resultWBRNAi00030063Inferred_automaticallyRNAi_primary
WBRNAi00042979Inferred_automaticallyRNAi_primary
Expr_patternExpr1027809
Expr1146943
Expr2011771
Expr2030009
Drives_constructWBCnstr00033120
Construct_productWBCnstr00033120
Microarray_results (12)
Expression_cluster (107)
InteractionWBInteraction000500514
WBInteraction000500515
WBInteraction000500516
WBInteraction000500517
Map_infoMapVPosition2.20922Error0.000486
PositivePositive_cloneC50H2Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00064648
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene