WormBase Tree Display for Gene: WBGene00008197
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| WBGene00008197 | SMap | S_parent | Sequence | C49C3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C49C3.7 | |||||||
| Molecular_name | C49C3.7 | ||||||||
| C49C3.7.1 | |||||||||
| CE19746 | |||||||||
| C49C3.7.2 | |||||||||
| Other_name | CELE_C49C3.7 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | C49C3.7 | ||||||||
| DB_info | Database | AceView | gene | 4S277 | |||||
| WormQTL | gene | WBGene00008197 | |||||||
| WormFlux | gene | WBGene00008197 | |||||||
| NDB | locus_tag | CELE_C49C3.7 | |||||||
| NCBI | gene | 178516 | |||||||
| RefSeq | protein | NM_001392455.1 | |||||||
| TREEFAM | TREEFAM_ID | TF322970 | |||||||
| TrEMBL | UniProtAcc | Q9XUF2 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XUF2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (114) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP4604 | ||||||||
| Ortholog | chrIV_pilon.g12879 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Paralog | WBGene00008196 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABarpapaaa; ABplaaaaaa; ABplpaaapa; ABprpaaapa; and germ line based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and hsf-1 based on microarray and RNA-seq studies. Is affected by nine chemicals including rotenone; manganese chloride; and Zidovudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C49C3.7 | |||||||
| Corresponding_transcript | C49C3.7.1 | ||||||||
| C49C3.7.2 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00007849 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00012128 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042785 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029970 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00077923 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011676 | ||||||||
| Expr1033561 | |||||||||
| Expr1146769 | |||||||||
| Expr2001767 | |||||||||
| Expr2019995 | |||||||||
| Drives_construct | WBCnstr00033165 | ||||||||
| Construct_product | WBCnstr00033165 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (117) | |||||||||
| Interaction (46) | |||||||||
| Map_info | Positive | Positive_clone | C49C3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 16.4918 | |||||||
| Reference | WBPaper00040537 | ||||||||
| Method | Gene |
