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WormBase Tree Display for Gene: WBGene00008195

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Name Class

WBGene00008195SMapS_parentSequenceC49C3
IdentityVersion2
NameCGC_nameceh-88Person_evidenceWBPerson83
Sequence_nameC49C3.5
Molecular_nameC49C3.5
C49C3.5.1
CE40301
C49C3.5.2
Other_nameCELE_C49C3.5Accession_evidenceNDBBX284604
Public_nameceh-88
DB_infoDatabaseAceViewgene4S273
WormQTLgeneWBGene00008195
WormFluxgeneWBGene00008195
NDBlocus_tagCELE_C49C3.5
PanthergeneCAEEL|WormBase=WBGene00008195|UniProtKB=Q9XUG3
familyPTHR10390
NCBIgene178514
RefSeqproteinNM_070680.3
TREEFAMTREEFAM_IDTF318427
TrEMBLUniProtAccQ9XUG3
UniProt_GCRPUniProtAccQ9XUG3
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
230 Sep 2011 16:40:16WBPerson2970Name_changeCGC_nameceh-88
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classceh
Allele (156)
StrainWBStrain00003391
WBStrain00049286
WBStrain00049291
RNASeq_FPKM (74)
GO_annotation (12)
Ortholog (22)
ParalogWBGene00000453Caenorhabditis elegansFrom_analysisPanther
WBGene00000454Caenorhabditis elegansFrom_analysisPanther
WBGene00000455Caenorhabditis elegansFrom_analysisPanther
WBGene00006775Caenorhabditis elegansFrom_analysisPanther
Structured_description (2)
Molecular_infoCorresponding_CDSC49C3.5
Corresponding_CDS_historyC49C3.5:wp160
Corresponding_transcriptC49C3.5.1
C49C3.5.2
Other_sequenceCBC09370_1
Associated_feature (4)
Transcription_factorWBTranscriptionFactor000601
Experimental_infoRNAi_resultWBRNAi00090648Inferred_automaticallyRNAi_primary
WBRNAi00029969Inferred_automaticallyRNAi_primary
WBRNAi00012127Inferred_automaticallyRNAi_primary
WBRNAi00012126Inferred_automaticallyRNAi_primary
WBRNAi00042783Inferred_automaticallyRNAi_primary
WBRNAi00061617Inferred_automaticallyRNAi_primary
WBRNAi00042784Inferred_automaticallyRNAi_primary
WBRNAi00029968Inferred_automaticallyRNAi_primary
WBRNAi00076225Inferred_automaticallyRNAi_primary
Expr_pattern (13)
Drives_constructWBCnstr00003860
WBCnstr00012625
WBCnstr00033167
WBCnstr00042446
WBCnstr00042451
Construct_productWBCnstr00022532
WBCnstr00033167
Microarray_results (38)
Expression_cluster (119)
InteractionWBInteraction000259579
WBInteraction000268125
WBInteraction000276166
WBInteraction000285572
WBInteraction000371044
WBInteraction000411806
WBInteraction000430008
WBInteraction000505235
WBInteraction000527914
WBInteraction000529979
Map_infoMapIVPosition16.4899Error0.005816
PositivePositive_cloneC49C3Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00027309
WBPaper00060123
WBPaper00061738
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene