WormBase Tree Display for Gene: WBGene00008175
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| WBGene00008175 | SMap | S_parent | Sequence | CHROMOSOME_III | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C48B4.12 | |||||||
| Molecular_name | C48B4.12a | ||||||||
| C48B4.12a.1 | |||||||||
| CE20576 | |||||||||
| C48B4.12b | |||||||||
| CE20577 | |||||||||
| C48B4.12b.1 | |||||||||
| Other_name | CELE_C48B4.12 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | C48B4.12 | ||||||||
| DB_info | Database | AceView | gene | 3K687 | |||||
| WormQTL | gene | WBGene00008175 | |||||||
| WormFlux | gene | WBGene00008175 | |||||||
| NDB | locus_tag | CELE_C48B4.12 | |||||||
| NCBI | gene | 176354 | |||||||
| RefSeq | protein | NM_066720.4 | |||||||
| NM_066721.5 | |||||||||
| TREEFAM | TREEFAM_ID | TF320157 | |||||||
| TrEMBL | UniProtAcc | G5EFZ6 | |||||||
| G5ECQ6 | |||||||||
| UniProt_GCRP | UniProtAcc | G5EFZ6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (16) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (23) | |||||||||
| Paralog | WBGene00011473 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| WBGene00010226 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in germ line; male-specific anatomical entity; and in male based on proteomic; RNA-seq; and microarray studies. Is affected by several genes including daf-2; rrf-3; and eat-2 based on microarray and RNA-seq studies. Is affected by nine chemicals including Alovudine; stavudine; and Psoralens based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C48B4.12a | |||||||
| C48B4.12b | |||||||||
| Corresponding_transcript | C48B4.12a.1 | ||||||||
| C48B4.12b.1 | |||||||||
| Associated_feature | WBsf1015634 | ||||||||
| WBsf225596 | |||||||||
| WBsf225597 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00112616 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00012092 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006987 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00002219 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042710 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029931 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1016638 | ||||||||
| Expr1146702 | |||||||||
| Expr2001731 | |||||||||
| Expr2019959 | |||||||||
| Drives_construct | WBCnstr00033178 | ||||||||
| Construct_product | WBCnstr00033178 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (79) | |||||||||
| Map_info | Positive | Positive_clone | C48B4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | 0.712139 | |||||||
| Method | Gene |
