WormBase Tree Display for Gene: WBGene00008156
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| WBGene00008156 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C47E12.13 | |||||||
| Molecular_name | C47E12.13a | ||||||||
| C47E12.13a.1 | |||||||||
| CE34762 | |||||||||
| C47E12.13b | |||||||||
| Other_name | CELE_C47E12.13 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | C47E12.13 | ||||||||
| DB_info | Database | AceView | gene | 4K770 | |||||
| WormQTL | gene | WBGene00008156 | |||||||
| WormFlux | gene | WBGene00008156 | |||||||
| NDB | locus_tag | CELE_C47E12.13 | |||||||
| NCBI | gene | 3565731 | |||||||
| RefSeq | protein | NR_131590.1 | |||||||
| NM_001027900.4 | |||||||||
| TrEMBL | UniProtAcc | Q7YTQ7 | |||||||
| UniProt_GCRP | UniProtAcc | Q7YTQ7 | |||||||
| RNAcentral | URSid | URS0000771E14 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (17) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00065622 | Caenorhabditis remanei | From_analysis | OMA | |||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00026301 | Caenorhabditis briggsae | From_analysis | Hillier-set | ||||||
| OrthoMCL | |||||||||
| OMA | |||||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| CSP26.g18688 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
| CSP39.g16529 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
| CSP40.g13057 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
| Cni-C47E12.13 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
| Csp5_scaffold_01675.g22458 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
| GCK72_014402 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
| chrIV_pilon.g11470 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in several structures, including ABarpaapap; ABarpaappa; ABarpaappp; ABarppaapa; and anterior hypodermis based on single-cell RNA-seq studies. Is affected by several genes including daf-2; rrf-3; and alg-1 based on microarray and RNA-seq studies. Is affected by ten chemicals including methylmercuric chloride; Alovudine; and stavudine based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C47E12.13a | |||||||
| Corresponding_transcript | C47E12.13b | ||||||||
| C47E12.13a.1 | |||||||||
| Associated_feature | WBsf230647 | ||||||||
| Experimental_info | Expr_pattern | Expr1016034 | |||||||
| Expr1146663 | |||||||||
| Expr2001713 | |||||||||
| Expr2019940 | |||||||||
| Drives_construct | WBCnstr00033197 | ||||||||
| Construct_product | WBCnstr00033197 | ||||||||
| Microarray_results | A_12_P109734 | ||||||||
| GPL13394_WBGene00008156 | |||||||||
| GPL13914_C47E12.13 | |||||||||
| GPL14144_C47E12.13_289-348_0.941_1_A | |||||||||
| GPL19516_CGZ0009505 | |||||||||
| GPL21109_C47E12.13 | |||||||||
| GPL8304_CE_WBGene00008156_A | |||||||||
| GPL8673_C47E12_13P00004 | |||||||||
| GPL8673_C47E12_13P00007 | |||||||||
| GPL8673_C47E12_13P00011 | |||||||||
| Expression_cluster (33) | |||||||||
| Map_info | Positive | Positive_clone | C47E12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 4.46439 | |||||||
| Method | Gene |
