WormBase Tree Display for Gene: WBGene00008126
expand all nodes | collapse all nodes | view schema
WBGene00008126 | SMap | S_parent | Sequence | C47A10 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | sre-21 | Person_evidence | WBPerson522 | |||||
Sequence_name | C47A10.4 | ||||||||
Molecular_name | C47A10.4 | ||||||||
C47A10.4.1 | |||||||||
CE38053 | |||||||||
Other_name | CELE_C47A10.4 | Accession_evidence | NDB | BX284605 | |||||
Public_name | sre-21 | ||||||||
DB_info | Database | AceView | gene | 5S248 | |||||
WormQTL | gene | WBGene00008126 | |||||||
WormFlux | gene | WBGene00008126 | |||||||
NDB | locus_tag | CELE_C47A10.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00008126|UniProtKB=O45306 | |||||||
family | PTHR23128 | ||||||||
NCBI | gene | 183529 | |||||||
RefSeq | protein | NM_075089.2 | |||||||
SwissProt | UniProtAcc | O45306 | |||||||
TREEFAM | TREEFAM_ID | TF316538 | |||||||
UniProt_GCRP | UniProtAcc | O45306 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 18 Jan 2005 14:50:06 | WBPerson2970 | Name_change | CGC_name | sre-21 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | sre | ||||||||
Allele (96) | |||||||||
Strain | WBStrain00003146 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00032427 | ||||||||
00032428 | |||||||||
00110834 | |||||||||
00110835 | |||||||||
Ortholog (13) | |||||||||
Structured_description | Concise_description | C47A10.4 is orthologous to the human gene ALBINISM, OCULAR, TYPE I (OA1; OMIM:300500), which when mutated leads to Nettleship-Falls type ocular albinism. | Curator_confirmed | WBPerson1823 | |||||
WBPerson567 | |||||||||
Date_last_updated | 06 Aug 2004 00:00:00 | ||||||||
Automated_description | Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. Expressed in ADLL; ADLR; and hypodermis. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info (4) | |||||||||
Experimental_info | RNAi_result | WBRNAi00012054 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00042639 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00012055 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr5520 | ||||||||
Expr14038 | |||||||||
Expr1014479 | |||||||||
Expr1146626 | |||||||||
Drives_construct | WBCnstr00003624 | ||||||||
WBCnstr00033219 | |||||||||
Construct_product | WBCnstr00033219 | ||||||||
Microarray_results (21) | |||||||||
Expression_cluster (27) | |||||||||
Interaction (31) | |||||||||
Map_info | Map | V | Position | 13.1985 | Error | 0.000684 | |||
Positive | Positive_clone | C47A10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |