WormBase Tree Display for Gene: WBGene00008036
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| WBGene00008036 | SMap | S_parent | Sequence | C40C9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C40C9.3 | |||||||
| Molecular_name | C40C9.3 | ||||||||
| C40C9.3.1 | |||||||||
| CE52765 | |||||||||
| Other_name | CELE_C40C9.3 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | C40C9.3 | ||||||||
| DB_info | Database | AceView | gene | XO267 | |||||
| WormQTL | gene | WBGene00008036 | |||||||
| WormFlux | gene | WBGene00008036 | |||||||
| NDB | locus_tag | CELE_C40C9.3 | |||||||
| NCBI | gene | 183358 | |||||||
| RefSeq | protein | NM_001368534.4 | |||||||
| TREEFAM | TREEFAM_ID | TF320472 | |||||||
| TrEMBL | UniProtAcc | Q18555 | |||||||
| UniProt_GCRP | UniProtAcc | Q18555 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (23) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrX_pilon.g20456 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Paralog | WBGene00045251 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00008113 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00013297 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00010007 | |||||||||
| Structured_description | Automated_description | Enriched in anterior spermatheca; coelomocyte; head mesodermal cell; and posterior spermatheca based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; hsf-1; and eat-2 based on microarray; tiling array; and RNA-seq studies. Is affected by fourteen chemicals including rotenone; Psoralens; and allantoin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C40C9.3 | |||||||
| Corresponding_CDS_history | C40C9.3:wp267 | ||||||||
| Corresponding_transcript | C40C9.3.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00042250 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00045616 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00059449 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00016802 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011811 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024731 | ||||||||
| Expr1146241 | |||||||||
| Drives_construct | WBCnstr00033287 | ||||||||
| Construct_product | WBCnstr00033287 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (100) | |||||||||
| Interaction | WBInteraction000247286 | ||||||||
| WBInteraction000294263 | |||||||||
| WBInteraction000305817 | |||||||||
| WBInteraction000312748 | |||||||||
| WBInteraction000313128 | |||||||||
| WBInteraction000391876 | |||||||||
| WBInteraction000416613 | |||||||||
| WBInteraction000417642 | |||||||||
| WBInteraction000441864 | |||||||||
| WBInteraction000445757 | |||||||||
| Map_info | Positive | Positive_clone | C40C9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 14.0364 | |||||||
| Method | Gene |
