WormBase Tree Display for Gene: WBGene00008005
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WBGene00008005 | SMap | S_parent | Sequence | C38D4 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||
Name | CGC_name | mip-1 | Person_evidence | WBPerson2360 | |||
WBPerson1815 | |||||||
Sequence_name | C38D4.4 | ||||||
Molecular_name | C38D4.4 | ||||||
C38D4.4.1 | |||||||
CE00917 | |||||||
Other_name | eggd-1 | Person_evidence | WBPerson33205 | ||||
CELE_C38D4.4 | Accession_evidence | NDB | BX284603 | ||||
Public_name | mip-1 | ||||||
DB_info | Database | AceView | gene | 3F883 | |||
WormQTL | gene | WBGene00008005 | |||||
WormFlux | gene | WBGene00008005 | |||||
NDB | locus_tag | CELE_C38D4.4 | |||||
NCBI | gene | 175635 | |||||
RefSeq | protein | NM_065587.7 | |||||
TrEMBL | UniProtAcc | Q18509 | |||||
UniProt_GCRP | UniProtAcc | Q18509 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (3) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | mip | ||||||
Allele (33) | |||||||
Strain | WBStrain00032612 | ||||||
WBStrain00049037 | |||||||
RNASeq_FPKM (74) | |||||||
Contained_in_operon | CEOP3220 | ||||||
Ortholog (14) | |||||||
Paralog | WBGene00010281 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||
WormBase-Compara | |||||||
Structured_description | Automated_description | Expressed in several structures, including Psub3; Psub4; Z2; Z3; and spermatocyte. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C38D4.4 | |||||
Corresponding_transcript | C38D4.4.1 | ||||||
Other_sequence | CR06004 | ||||||
CRC06615_1 | |||||||
Associated_feature (5) | |||||||
Experimental_info | RNAi_result | WBRNAi00007954 | Inferred_automatically | RNAi_primary | |||
WBRNAi00042158 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00029662 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00005026 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00011754 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00085105 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr15823 | ||||||
Expr15825 | |||||||
Expr15827 | |||||||
Expr15829 | |||||||
Expr1022049 | |||||||
Expr1033482 | |||||||
Expr1146156 | |||||||
Expr2001514 | |||||||
Expr2019736 | |||||||
Drives_construct | WBCnstr00033314 | ||||||
Construct_product | WBCnstr00033314 | ||||||
Regulate_expr_cluster | WBPaper00066038:mip-1(how5)_downregulated | ||||||
WBPaper00066038:mip-1(how5)_upregulated | |||||||
Microarray_results (20) | |||||||
Expression_cluster (152) | |||||||
Interaction (292) | |||||||
Map_info | Map | III | Position | -2.53715 | |||
Positive | Positive_clone | C38D4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00061596 | ||||||
WBPaper00062797 | |||||||
WBPaper00063233 | |||||||
WBPaper00064472 | |||||||
WBPaper00065946 | |||||||
WBPaper00066038 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |