WormBase Tree Display for Gene: WBGene00007885
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WBGene00007885 | SMap | S_parent | Sequence | C33A12 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name (5) | |||||||||
DB_info | Database (11) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 10 Jun 2005 11:17:00 | WBPerson2970 | Name_change | CGC_name | ugt-21 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ugt | ||||||||
Allele (21) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00000394 | ||||||||
00000395 | |||||||||
00000396 | |||||||||
00000397 | |||||||||
00000398 | |||||||||
00000399 | |||||||||
00000400 | |||||||||
00000401 | |||||||||
00115882 | |||||||||
Ortholog (83) | |||||||||
Paralog (74) | |||||||||
Structured_description | Automated_description | Predicted to enable UDP-glycosyltransferase activity. Predicted to be located in membrane. Is an ortholog of human UGT3A1 (UDP glycosyltransferase family 3 member A1) and UGT3A2 (UDP glycosyltransferase family 3 member A2). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info (5) | |||||||||
Experimental_info | RNAi_result | WBRNAi00011511 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00029451 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00041732 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00023072 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1028231 | ||||||||
Expr1145750 | |||||||||
Expr2017766 | |||||||||
Expr2035904 | |||||||||
Drives_construct | WBCnstr00033409 | ||||||||
Construct_product | WBCnstr00033409 | ||||||||
Microarray_results (16) | |||||||||
Expression_cluster (260) | |||||||||
SAGE_tag | SAGE:agaaaatggg | Strand | Antisense | ||||||
SAGE:aaagaaacat | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:cgtgacaaat | Strand | Antisense | |||||||
SAGE:ggagaacgat | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:aaagaaacattagaaaa | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:atcaaaacga | Strand | Antisense | |||||||
SAGE:gtggagctgtagtaatt | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:tcaaagtttt | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:actttctatc | Strand | Antisense | |||||||
SAGE:ggagaacgattagggaa | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
Interaction | WBInteraction000400095 | ||||||||
WBInteraction000445383 | |||||||||
WBInteraction000585669 | |||||||||
Map_info | Map | IV | Position | 4.28344 | Error | 0.000396 | |||
Positive | Positive_clone | C33A12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00028352 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00055433 | |||||||||
WBPaper00061938 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |