WormBase Tree Display for Gene: WBGene00007825
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WBGene00007825 | SMap | S_parent | Sequence | C30H6 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Allele (46) | ||||||
RNASeq_FPKM (74) | ||||||
Contained_in_operon | CEOP4608 | |||||
Ortholog (25) | ||||||
Paralog (11) | ||||||
Structured_description | Automated_description | Enriched in NSM; germ line; germline precursor cell; and intestine based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including hsf-1; let-7; and gld-1 based on microarray; proteomic; and RNA-seq studies. Is affected by five chemicals including rotenone; antimycin; and Chlorpyrifos based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Thioredoxin-like fold; Thioredoxin-like superfamily; and Thioredoxin-like. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | C30H6.8 | ||||
Corresponding_transcript | C30H6.8.1 | |||||
Other_sequence (29) | ||||||
Experimental_info | RNAi_result | WBRNAi00041581 | Inferred_automatically | RNAi_primary | ||
WBRNAi00011411 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00029371 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1012668 | |||||
Expr1033394 | ||||||
Expr1145605 | ||||||
Expr2001268 | ||||||
Expr2019490 | ||||||
Drives_construct | WBCnstr00033455 | |||||
Construct_product | WBCnstr00033455 | |||||
Microarray_results (20) | ||||||
Expression_cluster (95) | ||||||
SAGE_tag | SAGE:atcgtgtccgtgctgac | Strand | Sense | |||
Unambiguously_mapped | ||||||
SAGE:atcgtgtccg | Strand | Sense | ||||
Unambiguously_mapped | ||||||
SAGE:aacgacatct | Strand | Antisense | ||||
Interaction (12) | ||||||
Map_info | Positive | Positive_clone | C30H6 | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | IV | 16.6131 | ||||
Reference | WBPaper00038491 | |||||
WBPaper00055090 | ||||||
Method | Gene |