WormBase Tree Display for Gene: WBGene00007800
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WBGene00007800 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | C29A12.6 | |||||||
Molecular_name | C29A12.6a | ||||||||
C29A12.6a.1 | |||||||||
CE20535 | |||||||||
C29A12.6b | |||||||||
CE45869 | |||||||||
C29A12.6b.1 | |||||||||
Other_name | CELE_C29A12.6 | Accession_evidence | NDB | BX284605 | |||||
Public_name | C29A12.6 | ||||||||
DB_info | Database | AceView | gene | 5L331 | |||||
WormQTL | gene | WBGene00007800 | |||||||
WormFlux | gene | WBGene00007800 | |||||||
NDB | locus_tag | CELE_C29A12.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00007800|UniProtKB=G5EGU7 | |||||||
family | PTHR24020 | ||||||||
NCBI | gene | 179504 | |||||||
RefSeq | protein | NM_001269342.3 | |||||||
NM_001269343.3 | |||||||||
TREEFAM | TREEFAM_ID | TF330078 | |||||||
TrEMBL | UniProtAcc | G5EGU7 | |||||||
G5EFA0 | |||||||||
UniProt_GCRP | UniProtAcc | G5EGU7 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (75) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (26) | |||||||||
Paralog (10) | |||||||||
Structured_description | Automated_description | Enriched in hypodermis; intestine; neurons; seam cell; and sensory neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-12; rrf-3; and let-7 based on tiling array; microarray; and RNA-seq studies. Is affected by sixteen chemicals including methylmercuric chloride; rotenone; and stavudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: von Willebrand factor A-like domain superfamily; von Willebrand factor, type A; and von Willebrand factor type A domain. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C29A12.6a | |||||||
C29A12.6b | |||||||||
Corresponding_transcript (2) | |||||||||
Other_sequence (11) | |||||||||
Associated_feature | WBsf661661 | ||||||||
WBsf661662 | |||||||||
WBsf232423 | |||||||||
Experimental_info | RNAi_result | WBRNAi00015545 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00041441 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00011321 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1024351 | ||||||||
Expr1033385 | |||||||||
Expr1145470 | |||||||||
Expr2001212 | |||||||||
Expr2019434 | |||||||||
Drives_construct | WBCnstr00033472 | ||||||||
Construct_product | WBCnstr00033472 | ||||||||
Microarray_results (23) | |||||||||
Expression_cluster (93) | |||||||||
Interaction (12) | |||||||||
Map_info | Positive | Positive_clone | C29A12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | 2.82409 | |||||||
Method | Gene |