WormBase Tree Display for Gene: WBGene00007775
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WBGene00007775 | SMap | S_parent | Sequence | C27C12 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | CGC_name | acd-3 | Person_evidence | WBPerson260 | |||||
WBPerson145 | |||||||||
Sequence_name | C27C12.5 | ||||||||
Molecular_name | C27C12.5 | ||||||||
C27C12.5.1 | |||||||||
CE46356 | |||||||||
Other_name | tag-324 | ||||||||
CELE_C27C12.5 | Accession_evidence | NDB | BX284606 | ||||||
Public_name | acd-3 | ||||||||
DB_info | Database | AceView | gene | XP471 | |||||
WormQTL | gene | WBGene00007775 | |||||||
WormFlux | gene | WBGene00007775 | |||||||
NDB | locus_tag | CELE_C27C12.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00007775|UniProtKB=G3MU02 | |||||||
family | PTHR11690 | ||||||||
NCBI | gene | 182963 | |||||||
RefSeq | protein | NM_001270321.3 | |||||||
TrEMBL | UniProtAcc | G3MU02 | |||||||
UniProt_GCRP | UniProtAcc | G3MU02 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 22 Apr 2005 11:55:18 | WBPerson2970 | Name_change | CGC_name | tag-324 | ||||
3 | 24 Feb 2012 15:34:46 | WBPerson2970 | Name_change | CGC_name | acd-3 | ||||
Other_name | tag-324 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | acd | ||||||||
Allele (68) | |||||||||
Strain | WBStrain00036277 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (11) | |||||||||
Ortholog (17) | |||||||||
Paralog (30) | |||||||||
Structured_description | Automated_description | Predicted to enable ligand-gated sodium channel activity. Predicted to be involved in sodium ion transmembrane transport. Predicted to be located in membrane. Expressed in intestinal cell. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C27C12.5 | |||||||
Corresponding_CDS_history | C27C12.5:wp83 | ||||||||
C27C12.5a:wp271 | |||||||||
Corresponding_transcript | C27C12.5.1 | ||||||||
Other_sequence | Hbac_isotig07178 | ||||||||
Associated_feature | WBsf648767 | ||||||||
Experimental_info | RNAi_result | WBRNAi00041327 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00011251 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00029264 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr16222 | ||||||||
Expr16224 | |||||||||
Expr1017378 | |||||||||
Expr1033371 | |||||||||
Expr1145371 | |||||||||
Expr2009125 | |||||||||
Expr2027362 | |||||||||
Drives_construct | WBCnstr00037867 | ||||||||
WBCnstr00042832 | |||||||||
WBCnstr00042834 | |||||||||
Construct_product | WBCnstr00037867 | ||||||||
WBCnstr00042832 | |||||||||
Microarray_results (18) | |||||||||
Expression_cluster (84) | |||||||||
Interaction | WBInteraction000579064 | ||||||||
Map_info | Map | X | Position | 21.4512 | Error | 0.005604 | |||
Positive | Positive_clone | C27C12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 5226 | |||||||
4483 | |||||||||
5384 | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00027280 | ||||||||
WBPaper00064140 | |||||||||
WBPaper00064563 | |||||||||
WBPaper00065340 | |||||||||
WBPaper00065804 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |