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WormBase Tree Display for Gene: WBGene00007775

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Name Class

WBGene00007775SMapS_parentSequenceC27C12
IdentityVersion3
NameCGC_nameacd-3Person_evidenceWBPerson260
WBPerson145
Sequence_nameC27C12.5
Molecular_nameC27C12.5
C27C12.5.1
CE46356
Other_nametag-324
CELE_C27C12.5Accession_evidenceNDBBX284606
Public_nameacd-3
DB_infoDatabaseAceViewgeneXP471
WormQTLgeneWBGene00007775
WormFluxgeneWBGene00007775
NDBlocus_tagCELE_C27C12.5
PanthergeneCAEEL|WormBase=WBGene00007775|UniProtKB=G3MU02
familyPTHR11690
NCBIgene182963
RefSeqproteinNM_001270321.3
TrEMBLUniProtAccG3MU02
UniProt_GCRPUniProtAccG3MU02
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
222 Apr 2005 11:55:18WBPerson2970Name_changeCGC_nametag-324
324 Feb 2012 15:34:46WBPerson2970Name_changeCGC_nameacd-3
Other_nametag-324
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classacd
Allele (68)
StrainWBStrain00036277
RNASeq_FPKM (74)
GO_annotation (11)
Ortholog (17)
Paralog (30)
Structured_descriptionAutomated_descriptionPredicted to enable ligand-gated sodium channel activity. Predicted to be involved in sodium ion transmembrane transport. Predicted to be located in membrane. Expressed in intestinal cell.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC27C12.5
Corresponding_CDS_historyC27C12.5:wp83
C27C12.5a:wp271
Corresponding_transcriptC27C12.5.1
Other_sequenceHbac_isotig07178
Associated_featureWBsf648767
Experimental_infoRNAi_resultWBRNAi00041327Inferred_automaticallyRNAi_primary
WBRNAi00011251Inferred_automaticallyRNAi_primary
WBRNAi00029264Inferred_automaticallyRNAi_primary
Expr_patternExpr16222
Expr16224
Expr1017378
Expr1033371
Expr1145371
Expr2009125
Expr2027362
Drives_constructWBCnstr00037867
WBCnstr00042832
WBCnstr00042834
Construct_productWBCnstr00037867
WBCnstr00042832
Microarray_results (18)
Expression_cluster (84)
InteractionWBInteraction000579064
Map_infoMapXPosition21.4512Error0.005604
PositivePositive_cloneC27C12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point5226
4483
5384
Pseudo_map_position
ReferenceWBPaper00027280
WBPaper00064140
WBPaper00064563
WBPaper00065340
WBPaper00065804
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene