WormBase Tree Display for Gene: WBGene00007741
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WBGene00007741 | SMap | S_parent | Sequence | C26C6 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | glb-8 | Paper_evidence | WBPaper00031066 | |||||
Person_evidence | WBPerson1540 | ||||||||
Sequence_name | C26C6.7 | ||||||||
Molecular_name | C26C6.7 | ||||||||
C26C6.7.1 | |||||||||
CE42712 | |||||||||
Other_name | CELE_C26C6.7 | Accession_evidence | NDB | BX284601 | |||||
Public_name | glb-8 | ||||||||
DB_info | Database | AceView | gene | 1I85 | |||||
WormQTL | gene | WBGene00007741 | |||||||
WormFlux | gene | WBGene00007741 | |||||||
NDB | locus_tag | CELE_C26C6.7 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00007741|UniProtKB=B3WFV2 | |||||||
family | PTHR46458 | ||||||||
NCBI | gene | 182935 | |||||||
RefSeq | protein | NM_001136283.3 | |||||||
TrEMBL | UniProtAcc | B3WFV2 | |||||||
UniProt_GCRP | UniProtAcc | B3WFV2 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 22 Oct 2007 15:16:41 | WBPerson2970 | Name_change | CGC_name | glb-8 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | glb | ||||||||
Allele (33) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00006023 | ||||||||
00006024 | |||||||||
00006025 | |||||||||
00006026 | |||||||||
00115809 | |||||||||
00115810 | |||||||||
Ortholog (27) | |||||||||
Paralog (15) | |||||||||
Structured_description | Concise_description | glb-8 encodes a globin with no obvious function in mass RNAi assays; glb-8 expression is induced by anoxia in a HIF-1 dependent manner, although it is also paradoxically upregulated in a hif-1 mutant background; glb-8 expression is downregulated in a daf-2(e1370) mutant background under normoxic conditions; glb-8 expression is lower in L3 larvae than in young adults or dauers. | Paper_evidence | WBPaper00025067 | |||||
WBPaper00031066 | |||||||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Dec 2007 00:00:00 | ||||||||
Automated_description | Predicted to enable oxygen binding activity and oxygen carrier activity. Predicted to be involved in oxygen transport and response to hypoxia. Expressed in body wall musculature. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C26C6.7 | |||||||
Corresponding_CDS_history | C26C6.7:wp172 | ||||||||
C26C6.7a:wp273 | |||||||||
Corresponding_transcript | C26C6.7.1 | ||||||||
Other_sequence (25) | |||||||||
Associated_feature | WBsf656536 | ||||||||
WBsf984206 | |||||||||
WBsf984207 | |||||||||
WBsf218016 | |||||||||
Experimental_info | RNAi_result | WBRNAi00003022 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00041255 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr4890 | ||||||||
Expr8488 | |||||||||
Expr1019543 | |||||||||
Expr1033350 | |||||||||
Expr1145295 | |||||||||
Expr2012077 | |||||||||
Expr2030313 | |||||||||
Drives_construct | WBCnstr00013316 | ||||||||
WBCnstr00033519 | |||||||||
Construct_product | WBCnstr00033519 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (96) | |||||||||
Interaction | WBInteraction000435024 | ||||||||
Map_info | Map | I | Position | 2.0981 | Error | 0.000287 | |||
Positive | Positive_clone | C26C6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00031066 | ||||||||
WBPaper00032254 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |