WormBase Tree Display for Gene: WBGene00007662
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WBGene00007662 | SMap | S_parent | Sequence | C17H1 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name (5) | |||||||||
DB_info | Database | AceView | gene | 1N711 | |||||
WormQTL | gene | WBGene00007662 | |||||||
WormFlux | gene | WBGene00007662 | |||||||
NDB | locus_tag | CELE_C17H1.9 | |||||||
NCBI | gene | 3565285 | |||||||
RefSeq | mRNA | NM_001025832.3 | |||||||
protein | NP_001021003.1 | ||||||||
NM_001025832.4 | |||||||||
TREEFAM | TREEFAM_ID | TF322878 | |||||||
UniProt | UniProtAcc | Q7YX94 | |||||||
TrEMBL | UniProtAcc | Q7YX94 | |||||||
UniProt_GCRP | UniProtAcc | Q7YX94 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 26 Oct 2016 09:42:35 | WBPerson2970 | Name_change | CGC_name | pals-8 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | pals | ||||||||
Allele (47) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | Sp34_50055100 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | |||||
chrI_pilon.g2654 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Paralog (8) | |||||||||
Structured_description | Automated_description | Enriched in AIZ; AVG; dopaminergic neurons; and mechanosensory neurons based on tiling array and single-cell RNA-seq studies. Is affected by several genes including skn-1; eat-2; and elt-2 based on tiling array; microarray; and RNA-seq studies. Is affected by eleven chemicals including Mercuric Chloride; Zidovudine; and allantoin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C17H1.9 | |||||||
Corresponding_transcript | C17H1.9.1 | ||||||||
Associated_feature | WBsf985776 | ||||||||
WBsf985777 | |||||||||
WBsf985778 | |||||||||
WBsf985779 | |||||||||
WBsf1011014 | |||||||||
WBsf1011015 | |||||||||
WBsf218680 | |||||||||
Experimental_info | Expr_pattern | Expr1144899 | |||||||
Expr2014714 | |||||||||
Expr2032949 | |||||||||
Drives_construct | WBCnstr00033570 | ||||||||
Construct_product | WBCnstr00033570 | ||||||||
Microarray_results | A_12_P112086 | ||||||||
GPL19516_CGZ0005181 | |||||||||
GPL21109_C17H1.28 | |||||||||
GPL21109_C17H1.9 | |||||||||
GPL8304_CE_WBGene00007662_A | |||||||||
GPL8304_CE_WBGene00007662_B | |||||||||
GPL8673_C17H1_9P00761 | |||||||||
GPL8673_C17H1_9P00843 | |||||||||
GPL8673_C17H1_9P01003 | |||||||||
Expression_cluster (92) | |||||||||
Map_info | Map | I | Position | 17.2211 | |||||
Positive | Positive_clone | C17H1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |