WormBase Tree Display for Gene: WBGene00007641
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| WBGene00007641 | SMap | S_parent | Sequence | C17E4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | C17E4.1 | |||||||
| Molecular_name | C17E4.1a | ||||||||
| C17E4.1a.1 | |||||||||
| CE39896 | |||||||||
| C17E4.1b | |||||||||
| CE42658 | |||||||||
| C17E4.1b.1 | |||||||||
| Other_name | CELE_C17E4.1 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | C17E4.1 | ||||||||
| DB_info | Database | AceView | gene | 1J982 | |||||
| WormQTL | gene | WBGene00007641 | |||||||
| WormFlux | gene | WBGene00007641 | |||||||
| NDB | locus_tag | CELE_C17E4.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007641|UniProtKB=Q93232 | |||||||
| family | PTHR38631 | ||||||||
| NCBI | gene | 182724 | |||||||
| RefSeq | protein | NM_060099.3 | |||||||
| NM_001136280.4 | |||||||||
| TREEFAM | TREEFAM_ID | TF319599 | |||||||
| TrEMBL | UniProtAcc | B3GWD2 | |||||||
| Q93232 | |||||||||
| UniProt_GCRP | UniProtAcc | Q93232 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 27 Feb 2006 09:48:31 | WBPerson1983 | Event | Split_into | WBGene00044769 | ||||
| Split_into | WBGene00044769 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (29) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (24) | |||||||||
| Paralog | WBGene00020372 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00011425 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00044769 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| WBGene00018001 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ADE; amphid sheath cell; germ line; lateral ganglion; and somatic gonad precursor based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including skn-1; eat-2; and sek-1 based on RNA-seq and microarray studies. Is affected by thirteen chemicals including 1-methylnicotinamide; methylmercuric chloride; and manganese chloride based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C17E4.1a | |||||||
| C17E4.1b | |||||||||
| Corresponding_CDS_history | C17E4.1:wp155 | ||||||||
| Corresponding_transcript | C17E4.1a.1 | ||||||||
| C17E4.1b.1 | |||||||||
| Other_sequence | CJC04510_1 | ||||||||
| Associated_feature | WBsf649464 | ||||||||
| WBsf984675 | |||||||||
| WBsf984676 | |||||||||
| WBsf1010366 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00002967 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00040795 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021776 | ||||||||
| Expr1033299 | |||||||||
| Expr1144834 | |||||||||
| Expr2000905 | |||||||||
| Expr2019126 | |||||||||
| Drives_construct | WBCnstr00033587 | ||||||||
| Construct_product | WBCnstr00033587 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (130) | |||||||||
| Interaction | WBInteraction000144900 | ||||||||
| WBInteraction000409578 | |||||||||
| Map_info | Positive | Positive_clone | C17E4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 3.75992 | |||||||
| Method | Gene |
