WormBase Tree Display for Gene: WBGene00007628
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| WBGene00007628 | SMap | S_parent | Sequence | C16C10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C16C10.8 | |||||||
| Molecular_name | C16C10.8 | ||||||||
| C16C10.8.1 | |||||||||
| CE01499 | |||||||||
| Other_name | CELE_C16C10.8 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | C16C10.8 | ||||||||
| DB_info | Database | AceView | gene | 3F252 | |||||
| WormQTL | gene | WBGene00007628 | |||||||
| WormFlux | gene | WBGene00007628 | |||||||
| NDB | locus_tag | CELE_C16C10.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007628|UniProtKB=Q09464 | |||||||
| family | PTHR13100 | ||||||||
| NCBI | gene | 175531 | |||||||
| RefSeq | protein | NM_065428.8 | |||||||
| SwissProt | UniProtAcc | Q09464 | |||||||
| TREEFAM | TREEFAM_ID | TF314925 | |||||||
| UniProt_GCRP | UniProtAcc | Q09464 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (18) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00054078 | ||||||||
| 00054079 | |||||||||
| 00054080 | |||||||||
| 00054081 | |||||||||
| 00054082 | |||||||||
| 00054083 | |||||||||
| 00054084 | |||||||||
| 00115728 | |||||||||
| Contained_in_operon | CEOP3156 | ||||||||
| Ortholog (33) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA binding activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II and rRNA processing. Predicted to be located in nucleolus. Is an ortholog of human LYAR (Ly1 antibody reactive). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C16C10.8 | |||||||
| Corresponding_transcript | C16C10.8.1 | ||||||||
| Other_sequence (39) | |||||||||
| Associated_feature | WBsf992051 | ||||||||
| WBsf1014720 | |||||||||
| WBsf226473 | |||||||||
| WBsf226474 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00103192 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00040685 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00022287 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005014 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027773 | ||||||||
| Expr1033294 | |||||||||
| Expr1144730 | |||||||||
| Expr2000853 | |||||||||
| Expr2019070 | |||||||||
| Drives_construct | WBCnstr00033595 | ||||||||
| Construct_product | WBCnstr00033595 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (111) | |||||||||
| Interaction | WBInteraction000044887 | ||||||||
| WBInteraction000044889 | |||||||||
| WBInteraction000044890 | |||||||||
| WBInteraction000044891 | |||||||||
| WBInteraction000046280 | |||||||||
| WBInteraction000541986 | |||||||||
| WBInteraction000553153 | |||||||||
| WBInteraction000553661 | |||||||||
| WBInteraction000553800 | |||||||||
| WBInteraction000582159 | |||||||||
| Map_info | Positive | Positive_clone | C16C10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -3.74397 | |||||||
| Reference | WBPaper00036306 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
