WormBase Tree Display for Gene: WBGene00007621
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| WBGene00007621 | SMap | S_parent | Sequence | CHROMOSOME_I | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C16C2.4 | |||||||
| Molecular_name | C16C2.4a | ||||||||
| C16C2.4a.1 | |||||||||
| CE15621 | |||||||||
| C16C2.4b | |||||||||
| CE52555 | |||||||||
| C16C2.4b.1 | |||||||||
| Other_name | CELE_C16C2.4 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | C16C2.4 | ||||||||
| DB_info | Database | AceView | gene | 1K290 | |||||
| WormQTL | gene | WBGene00007621 | |||||||
| WormFlux | gene | WBGene00007621 | |||||||
| NDB | locus_tag | CELE_C16C2.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007621|UniProtKB=A0A2K5ATM8 | |||||||
| family | PTHR16019 | ||||||||
| NCBI | gene | 172821 | |||||||
| RefSeq | protein | NM_001361824.4 | |||||||
| NM_060182.8 | |||||||||
| TrEMBL | UniProtAcc | O17591 | |||||||
| A0A2K5ATM8 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A2K5ATM8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (24) | |||||||||
| Strain | WBStrain00036713 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00003052 | ||||||||
| 00003053 | |||||||||
| 00003054 | |||||||||
| 00003055 | |||||||||
| 00003056 | |||||||||
| 00003057 | |||||||||
| Contained_in_operon | CEOP1560 | ||||||||
| Ortholog (30) | |||||||||
| Paralog | WBGene00022401 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to be involved in TORC2 signaling and regulation of short-term neuronal synaptic plasticity. Predicted to be located in Golgi apparatus; nucleus; and synapse. Is an ortholog of human SYAP1 (synapse associated protein 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C16C2.4a | |||||||
| C16C2.4b | |||||||||
| Corresponding_transcript | C16C2.4a.1 | ||||||||
| C16C2.4b.1 | |||||||||
| Other_sequence (14) | |||||||||
| Associated_feature | WBsf664774 | ||||||||
| WBsf220135 | |||||||||
| WBsf220136 | |||||||||
| WBsf220137 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00116900 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00002960 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062125 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033576 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00040694 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027947 | ||||||||
| Expr1033287 | |||||||||
| Expr1144735 | |||||||||
| Expr2000855 | |||||||||
| Expr2019072 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (94) | |||||||||
| Interaction (12) | |||||||||
| Map_info | Positive | Positive_clone | C16C2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 3.86093 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
