WormBase Tree Display for Gene: WBGene00007609
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| WBGene00007609 | SMap | S_parent | Sequence | C15C8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C15C8.7 | |||||||
| Molecular_name | C15C8.7 | ||||||||
| C15C8.7.1 | |||||||||
| CE27580 | |||||||||
| Other_name | 5N224 | Accession_evidence | EMBL | AF292052 | |||||
| CELE_C15C8.7 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | C15C8.7 | ||||||||
| DB_info | Database | AceView | gene | 5N224 | |||||
| WormQTL | gene | WBGene00007609 | |||||||
| WormFlux | gene | WBGene00007609 | |||||||
| NDB | locus_tag | CELE_C15C8.7 | |||||||
| NCBI | gene | 179744 | |||||||
| RefSeq | protein | NM_001392631.1 | |||||||
| TREEFAM | TREEFAM_ID | TF319465 | |||||||
| TrEMBL | UniProtAcc | G5EC11 | |||||||
| UniProt_GCRP | UniProtAcc | G5EC11 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (20) | |||||||||
| Strain | WBStrain00001935 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP5372 | ||||||||
| Ortholog (13) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including body wall muscle cell; distal tip cell; germ line; neurons; and retrovesicular ganglion based on Chronogram; tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including elt-2; fbf-1; and sma-2 based on microarray and RNA-seq studies. Is affected by six chemicals including rotenone; multi-walled carbon nanotube; and silicon dioxide nanoparticle based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C15C8.7 | |||||||
| Corresponding_transcript | C15C8.7.1 | ||||||||
| Other_sequence | HCC05256_1 | ||||||||
| CB043606.1 | |||||||||
| TDC00141_1 | |||||||||
| HC08034 | |||||||||
| CJC02900_1 | |||||||||
| Tcir_isotig28240 | |||||||||
| Tcir_isotig09879 | |||||||||
| Associated_feature | WBsf034310 | ||||||||
| WBsf1001639 | |||||||||
| WBsf234716 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00033626 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00040606 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram569 | ||||||||
| Expr5270 | |||||||||
| Expr1020360 | |||||||||
| Expr1033281 | |||||||||
| Expr1144661 | |||||||||
| Expr2000819 | |||||||||
| Expr2019037 | |||||||||
| Drives_construct | WBCnstr00002723 | ||||||||
| WBCnstr00033609 | |||||||||
| Construct_product | WBCnstr00033609 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (94) | |||||||||
| Interaction | WBInteraction000223102 | ||||||||
| WBInteraction000235305 | |||||||||
| WBInteraction000306595 | |||||||||
| WBInteraction000345403 | |||||||||
| WBInteraction000351937 | |||||||||
| WBInteraction000391150 | |||||||||
| WBInteraction000401970 | |||||||||
| WBInteraction000438781 | |||||||||
| WBInteraction000446400 | |||||||||
| Map_info | Positive | Positive_clone | C15C8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 4.61883 | |||||||
| Method | Gene |
