WormBase Tree Display for Gene: WBGene00007543
expand all nodes | collapse all nodes | view schema
WBGene00007543 | SMap | S_parent | Sequence | C12D8 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | fipr | ||||||
Allele (12) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (35) | |||||||
Paralog (17) | |||||||
Structured_description | Automated_description | Enriched in XXX cell; arcade cell; ciliated neurons; and germ line based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on RNA-seq and microarray studies. Is affected by thirteen chemicals including methylmercury hydroxide; manganese chloride; and multi-walled carbon nanotube based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C12D8.16 | |||||
Corresponding_transcript | C12D8.16.1 | ||||||
Associated_feature | WBsf647144 | ||||||
WBsf1001075 | |||||||
WBsf1020278 | |||||||
WBsf232346 | |||||||
Experimental_info | RNAi_result | WBRNAi00010655 | Inferred_automatically | RNAi_primary | |||
Expr_pattern | Expr1014437 | ||||||
Expr1144458 | |||||||
Expr2011790 | |||||||
Expr2030028 | |||||||
Drives_construct | WBCnstr00033661 | ||||||
Construct_product | WBCnstr00033661 | ||||||
Microarray_results | A_12_P115592 | ||||||
GPL14144_C12D8.16_161-220_0.965_1_A | |||||||
GPL19516_CGZ0004343 | |||||||
GPL21109_C12D8.16 | |||||||
GPL8304_CE_WBGene00007543_A | |||||||
GPL8673_C12D8_16P00001 | |||||||
GPL8673_C12D8_16P00062 | |||||||
GPL8673_C12D8_16P00132 | |||||||
Expression_cluster (135) | |||||||
Map_info | Map | V | Position | 2.38936 | Error | 0.001388 | |
Positive | Positive_clone | C12D8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00064648 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |