WormBase Tree Display for Gene: WBGene00007530
expand all nodes | collapse all nodes | view schema
| WBGene00007530 | SMap | S_parent | Sequence | C11H1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C11H1.5 | |||||||
| Molecular_name | C11H1.5 | ||||||||
| C11H1.5.1 | |||||||||
| CE37315 | |||||||||
| Other_name | CELE_C11H1.5 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | C11H1.5 | ||||||||
| DB_info | Database | AceView | gene | XO918 | |||||
| WormQTL | gene | WBGene00007530 | |||||||
| WormFlux | gene | WBGene00007530 | |||||||
| NDB | locus_tag | CELE_C11H1.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007530|UniProtKB=Q17910 | |||||||
| family | PTHR11311 | ||||||||
| NCBI | gene | 182525 | |||||||
| RefSeq | protein | NM_077986.5 | |||||||
| TrEMBL | UniProtAcc | Q17910 | |||||||
| UniProt_GCRP | UniProtAcc | Q17910 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (90) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (20) | |||||||||
| Paralog | WBGene00006893 | Caenorhabditis elegans | From_analysis | Panther | |||||
| Structured_description | Automated_description | Enriched in ABalapppaa; ABaraappaa; PVR; g2; and hyp3 based on single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by seventeen chemicals including methylmercury hydroxide; 1-methylnicotinamide; and nicotinic acid based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Thrombospondin type-1 (TSP1) repeat; Somatomedin-B and thrombospondin type-1 domain-containing protein; and Thrombospondin type-1 (TSP1) repeat superfamily. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C11H1.5 | |||||||
| Corresponding_CDS_history | C11H1.5:wp131 | ||||||||
| Corresponding_transcript | C11H1.5.1 | ||||||||
| Other_sequence | CGC01177_1 | ||||||||
| Oden_isotig25769 | |||||||||
| CGC01098_1 | |||||||||
| Associated_feature | WBsf1007872 | ||||||||
| WBsf1007873 | |||||||||
| WBsf1024375 | |||||||||
| WBsf1024376 | |||||||||
| WBsf238224 | |||||||||
| WBsf238225 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00010629 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00040362 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028768 | ||||||||
| Expr1144430 | |||||||||
| Expr2000713 | |||||||||
| Expr2018935 | |||||||||
| Drives_construct | WBCnstr00033673 | ||||||||
| Construct_product | WBCnstr00033673 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (156) | |||||||||
| Interaction (16) | |||||||||
| Map_info | Positive | Positive_clone | C11H1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 16.6775 | |||||||
| Method | Gene |
