WormBase Tree Display for Gene: WBGene00007504
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| WBGene00007504 | SMap | S_parent | Sequence | C09H10 | ||
|---|---|---|---|---|---|---|
| Identity (6) | ||||||
| Gene_info | Biotype | SO:0001217 | ||||
| Gene_class | nbs | |||||
| Allele (25) | ||||||
| Strain | WBStrain00000297 | |||||
| WBStrain00000298 | ||||||
| WBStrain00051121 | ||||||
| RNASeq_FPKM (74) | ||||||
| Contained_in_operon | CEOP2717 | |||||
| Ortholog (18) | ||||||
| Structured_description | Automated_description | Enriched in germ line; germline precursor cell; intestine; and muscle cell based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including let-60; eat-2; and sek-1 based on tiling array; RNA-seq; and microarray studies. Is affected by seven chemicals including rotenone; allantoin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SMAD/FHA domain superfamily; FHA domain; and Forkhead-associated (FHA) domain. | Paper_evidence | WBPaper00065943 | ||
| Curator_confirmed (2) | ||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||
| Molecular_info | Corresponding_CDS | C09H10.10a | ||||
| C09H10.10b | ||||||
| Corresponding_CDS_history | C09H10.10:wp196 | |||||
| C09H10.10:wp210 | ||||||
| Corresponding_transcript | C09H10.10a.1 | |||||
| C09H10.10b.1 | ||||||
| Other_sequence | CGC00691_1 | |||||
| CJC17395_1 | ||||||
| CR05853 | ||||||
| CRC06501_1 | ||||||
| Associated_feature | WBsf989621 | |||||
| WBsf223888 | ||||||
| Experimental_info | RNAi_result (31) | |||||
| Expr_pattern | Expr1020252 | |||||
| Expr1033227 | ||||||
| Expr1144322 | ||||||
| Expr2000671 | ||||||
| Expr2018893 | ||||||
| Microarray_results (19) | ||||||
| Expression_cluster (86) | ||||||
| Interaction | WBInteraction000556903 | |||||
| WBInteraction000556904 | ||||||
| Map_info | Map | II | Position | 3.20732 | ||
| Positive | Positive_clone | C09H10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
| Pseudo_map_position | ||||||
| Reference | WBPaper00054279 | |||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
| Method | Gene |
