WormBase Tree Display for Gene: WBGene00007504
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WBGene00007504 | SMap | S_parent | Sequence | C09H10 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | nbs-1 | |||||
Sequence_name | C09H10.10 | ||||||
Molecular_name | C09H10.10a | ||||||
C09H10.10a.1 | |||||||
CE44319 | |||||||
C09H10.10b | |||||||
CE43232 | |||||||
C09H10.10b.1 | |||||||
Other_name | CELE_C09H10.10 | Accession_evidence | NDB | BX284602 | |||
Public_name | nbs-1 | ||||||
DB_info | Database | AceView | gene | 2L386 | |||
WormQTL | gene | WBGene00007504 | |||||
SignaLink | protein | WBGene00007504 | |||||
WormFlux | gene | WBGene00007504 | |||||
NDB | locus_tag | CELE_C09H10.10 | |||||
NCBI | gene | 174694 | |||||
RefSeq | protein | NM_063973.3 | |||||
NM_001361876.2 | |||||||
TrEMBL | UniProtAcc | Q9U3Q2 | |||||
A0A2K5ATP9 | |||||||
UniProt_GCRP | UniProtAcc | Q9U3Q2 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | nbs | ||||||
Allele (25) | |||||||
Strain | WBStrain00000297 | ||||||
WBStrain00000298 | |||||||
WBStrain00051121 | |||||||
RNASeq_FPKM (74) | |||||||
Contained_in_operon | CEOP2717 | ||||||
Ortholog (18) | |||||||
Structured_description | Automated_description | Enriched in germ line; germline precursor cell; intestine; and muscle cell based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including let-60; eat-2; and sek-1 based on tiling array; RNA-seq; and microarray studies. Is affected by seven chemicals including rotenone; allantoin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SMAD/FHA domain superfamily; FHA domain; and Forkhead-associated (FHA) domain. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C09H10.10a | |||||
C09H10.10b | |||||||
Corresponding_CDS_history (2) | |||||||
Corresponding_transcript | C09H10.10a.1 | ||||||
C09H10.10b.1 | |||||||
Other_sequence | CGC00691_1 | ||||||
CJC17395_1 | |||||||
CR05853 | |||||||
CRC06501_1 | |||||||
Associated_feature | WBsf989621 | ||||||
WBsf223888 | |||||||
Experimental_info | RNAi_result (31) | ||||||
Expr_pattern | Expr1020252 | ||||||
Expr1033227 | |||||||
Expr1144322 | |||||||
Expr2000671 | |||||||
Expr2018893 | |||||||
Microarray_results (19) | |||||||
Expression_cluster (86) | |||||||
Interaction | WBInteraction000556903 | ||||||
WBInteraction000556904 | |||||||
Map_info | Map | II | Position | 3.20732 | |||
Positive | Positive_clone | C09H10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00054279 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |