WormBase Tree Display for Gene: WBGene00007496

WBGene00007496 SMap: S_parent: Sequence: C09G9
  Identity (6)
  Gene_info: Biotype: SO:0001217
    Gene_class: npax
    Allele (39)
    RNASeq_FPKM (74)
    GO_annotation: 00059517
      00059518
      00059519
      00115599
      00115600
    Ortholog (24)
    Paralog: WBGene00003937 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00018591 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00017664 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00011257 Caenorhabditis elegans From_analysis: TreeFam
    Structured_description: Concise_description: npax-4 is a divergent Paired domain-only protein; it encodes only the first part of the Paired domain (the PAI subdomain) and an EH1 (octapeptide) motif; the Paired domain is a DNA-binding domain; the PAI subdomain is likely also DNA-binding; npax genes mostly diverged from complete Paired domain-only and/or Paired homeobox genes; no obvious orthologs are present in arthropods or vertebrates; npax-4 is involved in embryo development and lipid storage; npax-4 is expressed in the pseudocoelom and the body wall musculature. Paper_evidence: WBPaper00005655
            WBPaper00025054
            WBPaper00029055
            WBPaper00045974
            WBPaper00046864
            WBPaper00003599
            WBPaper00051112
          Person_evidence: WBPerson83
          Curator_confirmed: WBPerson324
          Date_last_updated: 20 Apr 2017 00:00:00
      Automated_description: Predicted to enable DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Expressed in body wall musculature and pseudocoelom. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C09G9.7a
      C09G9.7b
    Corresponding_CDS_history: C09G9.7:wp164
    Corresponding_transcript: C09G9.7a.1
      C09G9.7b.1
    Associated_feature (5)
    Transcription_factor: WBTranscriptionFactor000955
  Experimental_info: RNAi_result: WBRNAi00040250 Inferred_automatically: RNAi_primary
      WBRNAi00023935 Inferred_automatically: RNAi_primary
      WBRNAi00023647 Inferred_automatically: RNAi_primary
      WBRNAi00092958 Inferred_automatically: RNAi_primary
      WBRNAi00028747 Inferred_automatically: RNAi_primary
      WBRNAi00023042 Inferred_automatically: RNAi_primary
      WBRNAi00023135 Inferred_automatically: RNAi_primary
      WBRNAi00010557 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr7428
      Expr1018200
      Expr1144319
      Expr2014364
      Expr2032605
    Drives_construct: WBCnstr00012571
      WBCnstr00033694
    Construct_product: WBCnstr00017311
      WBCnstr00033694
    Microarray_results (18)
    Expression_cluster (89)
    Interaction: WBInteraction000226046
      WBInteraction000349789
      WBInteraction000437237
      WBInteraction000445250
  Map_info: Map: IV Position: 3.99433 Error: 0.002002
    Positive: Positive_clone: C09G9 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00003599
    WBPaper00061738
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene