WormBase Tree Display for Gene: WBGene00007493
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WBGene00007493 | SMap | S_parent | Sequence | C09G9 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | npp-23 | Person_evidence | WBPerson1780 | |||||
Sequence_name | C09G9.2 | ||||||||
Molecular_name | C09G9.2a | ||||||||
C09G9.2a.1 | |||||||||
CE35389 | |||||||||
C09G9.2b | |||||||||
CE42621 | |||||||||
C09G9.2b.1 | |||||||||
Other_name | CELE_C09G9.2 | Accession_evidence | NDB | BX284604 | |||||
Public_name | npp-23 | ||||||||
DB_info | Database | AceView | gene | 4J632 | |||||
WormQTL | gene | WBGene00007493 | |||||||
WormFlux | gene | WBGene00007493 | |||||||
NDB | locus_tag | CELE_C09G9.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00007493|UniProtKB=Q17872 | |||||||
family | PTHR22652 | ||||||||
NCBI | gene | 182462 | |||||||
RefSeq | protein | NM_069136.4 | |||||||
NM_001136373.4 | |||||||||
TREEFAM | TREEFAM_ID | TF321692 | |||||||
TrEMBL | UniProtAcc | Q17872 | |||||||
B3GWB1 | |||||||||
UniProt_GCRP | UniProtAcc | Q17872 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 10 Jan 2012 11:54:45 | WBPerson2970 | Name_change | CGC_name | npp-23 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | npp | ||||||||
Allele (19) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00005958 | ||||||||
00005959 | |||||||||
00059511 | |||||||||
00059512 | |||||||||
Contained_in_operon | CEOP4310 | ||||||||
Ortholog (31) | |||||||||
Structured_description | Automated_description | Located in kinetochore. Part of nuclear pore. Is an ortholog of human NUP43 (nucleoporin 43). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed (2) | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C09G9.2a | |||||||
C09G9.2b | |||||||||
Corresponding_CDS_history | C09G9.2:wp109 | ||||||||
Corresponding_transcript | C09G9.2a.1 | ||||||||
C09G9.2b.1 | |||||||||
Other_sequence | CBC01902_1 | ||||||||
Associated_feature | WBsf652021 | ||||||||
WBsf230484 | |||||||||
Experimental_info | RNAi_result | WBRNAi00040244 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00010553 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00028744 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1023502 | ||||||||
Expr1033223 | |||||||||
Expr1144314 | |||||||||
Expr2014383 | |||||||||
Expr2032624 | |||||||||
Drives_construct | WBCnstr00033697 | ||||||||
Construct_product | WBCnstr00009670 | ||||||||
WBCnstr00033697 | |||||||||
Microarray_results (20) | |||||||||
Expression_cluster (108) | |||||||||
Interaction | WBInteraction000312030 | ||||||||
WBInteraction000325692 | |||||||||
WBInteraction000369284 | |||||||||
WBInteraction000452996 | |||||||||
WBInteraction000519316 | |||||||||
WBInteraction000559873 | |||||||||
WBInteraction000574914 | |||||||||
WBInteraction000575755 | |||||||||
Map_info | Map | IV | Position | 3.98817 | |||||
Positive | Positive_clone | C09G9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |