WormBase Tree Display for Gene: WBGene00007453

WBGene00007453 SMap: S_parent: Sequence: C08F11
  Identity: Version: 2
    Name: CGC_name: fbxa-98 Person_evidence: WBPerson655
      Sequence_name: C08F11.5
      Molecular_name: C08F11.5a
        C08F11.5a.1
        CE17383
        C08F11.5b
        CE47854
        C08F11.5b.1
      Other_name: CELE_C08F11.5 Accession_evidence: NDB BX284604
      Public_name: fbxa-98
    DB_info: Database: AceView gene 4O397
        WormQTL gene WBGene00007453
        WormFlux gene WBGene00007453
        NDB locus_tag CELE_C08F11.5
        Panther gene CAEEL|WormBase=WBGene00007453|UniProtKB=Q9U3Q8
          family PTHR23015
        NCBI gene 182421
        RefSeq protein NM_070230.5
            NM_001276881.3
        TrEMBL UniProtAcc Q9U3Q8
            K8FDX4
        UniProt_GCRP UniProtAcc Q9U3Q8
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 12 Dec 2005 15:18:56 WBPerson2970 Name_change: CGC_name: fbxa-98
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxa
    Allele (37)
    RNASeq_FPKM (74)
    Ortholog (29)
    Paralog (227)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in AVA; head mesodermal cell; intestine; and sensory neurons based on tiling array and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by nineteen chemicals including methylmercuric chloride; levamisole; and stavudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C08F11.5a
      C08F11.5b
    Corresponding_transcript: C08F11.5a.1
      C08F11.5b.1
    Other_sequence: MH01890
      MHC00264_1
    Associated_feature: WBsf646532
      WBsf998440
      WBsf1018558
      WBsf229445
  Experimental_info: RNAi_result: WBRNAi00010473 Inferred_automatically: RNAi_primary
      WBRNAi00040121 Inferred_automatically: RNAi_primary
      WBRNAi00028685 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1028016
      Expr1144194
      Expr2011592
      Expr2029831
    Drives_construct: WBCnstr00033727
    Construct_product: WBCnstr00033727
    Microarray_results (16)
    Expression_cluster (182)
    Interaction: WBInteraction000228819
  Map_info: Map: IV Position: 10.5311 Error: 0.002628
    Positive: Positive_clone: C08F11 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene