WormBase Tree Display for Gene: WBGene00007310
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| WBGene00007310 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | irld-21 | Person_evidence | WBPerson260 | |||||
| Sequence_name | C04G2.11 | ||||||||
| Molecular_name | C04G2.11 | ||||||||
| C04G2.11.1 | |||||||||
| CE48131 | |||||||||
| Other_name | CELE_C04G2.11 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | irld-21 | ||||||||
| DB_info | Database | AceView | gene | 4K882 | |||||
| WormQTL | gene | WBGene00007310 | |||||||
| WormFlux | gene | WBGene00007310 | |||||||
| NDB | locus_tag | CELE_C04G2.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007310|UniProtKB=G5EDS6 | |||||||
| family | PTHR21662 | ||||||||
| NCBI | gene | 182235 | |||||||
| RefSeq | protein | NM_069439.4 | |||||||
| TREEFAM | TREEFAM_ID | TF317243 | |||||||
| TrEMBL | UniProtAcc | G5EDS6 | |||||||
| UniProt_GCRP | UniProtAcc | G5EDS6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:47 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 25 May 2012 15:57:08 | WBPerson2970 | Name_change | CGC_name | irld-21 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | irld | ||||||||
| Allele (31) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (17) | |||||||||
| Paralog (75) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ASJ; Z1.p; intestine; male distal tip cell; and somatic gonad precursor based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including eat-2; mex-3; and mex-1 based on tiling array and RNA-seq studies. Is affected by five chemicals including Psoralens; allantoin; and metformin based on RNA-seq studies. Is predicted to encode a protein with the following domains: Receptor L domain; Receptor L-domain; and Receptor L-domain superfamily. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C04G2.11 | |||||||
| Corresponding_CDS_history | C04G2.11:wp235 | ||||||||
| Corresponding_transcript | C04G2.11.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00039657 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00010146 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019879 | ||||||||
| Expr1143751 | |||||||||
| Expr2012836 | |||||||||
| Expr2031072 | |||||||||
| Drives_construct | WBCnstr00033838 | ||||||||
| Construct_product | WBCnstr00033838 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (29) | |||||||||
| Interaction | WBInteraction000150589 | ||||||||
| WBInteraction000351163 | |||||||||
| WBInteraction000442067 | |||||||||
| Map_info | Map | IV | Position | 4.53076 | |||||
| Positive | Positive_clone | C04G2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
