WormBase Tree Display for Gene: WBGene00007299
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WBGene00007299 | SMap | S_parent | Sequence | C04F12 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name (4) | |||||||||
DB_info | Database | AceView | gene | 1K264 | |||||
WormQTL | gene | WBGene00007299 | |||||||
WormFlux | gene | WBGene00007299 | |||||||
NDB | locus_tag | CELE_C04F12.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00007299|UniProtKB=Q9XVE8 | |||||||
family | PTHR34721 | ||||||||
NCBI | gene | 182226 | |||||||
RefSeq | protein | NM_060176.4 | |||||||
TREEFAM | TREEFAM_ID | TF322207 | |||||||
TrEMBL | UniProtAcc | Q9XVE8 | |||||||
UniProt_GCRP | UniProtAcc | Q9XVE8 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:47 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele | WBVar01499739 | ||||||||
WBVar00662291 | |||||||||
WBVar00662292 | |||||||||
WBVar00662293 | |||||||||
WBVar00662294 | |||||||||
WBVar01910162 | |||||||||
WBVar00250129 | |||||||||
WBVar01499786 | |||||||||
WBVar01499054 | |||||||||
WBVar01498959 | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (18) | |||||||||
Paralog (9) | |||||||||
Structured_description | Automated_description | Enriched in several structures, including germ line; germline precursor cell; intestine; neurons; and ventral nerve cord based on Chronogram; tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray; RNA-seq; and tiling array studies. Is affected by thirteen chemicals including rotenone; D-glucose; and stavudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C04F12.5 | |||||||
Corresponding_transcript | C04F12.5.1 | ||||||||
C04F12.5.2 | |||||||||
Other_sequence | CJC03914_1 | ||||||||
CJC00266_1 | |||||||||
CR02252 | |||||||||
CBC00815_1 | |||||||||
Associated_feature | WBsf984776 | ||||||||
WBsf984777 | |||||||||
WBsf220130 | |||||||||
Experimental_info | RNAi_result | WBRNAi00028442 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00061980 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00039632 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Chronogram296 | ||||||||
Expr5145 | |||||||||
Expr1025318 | |||||||||
Expr1033147 | |||||||||
Expr1143728 | |||||||||
Expr2000412 | |||||||||
Expr2018636 | |||||||||
Drives_construct | WBCnstr00003219 | ||||||||
WBCnstr00033849 | |||||||||
Construct_product | WBCnstr00033849 | ||||||||
Microarray_results (17) | |||||||||
Expression_cluster (148) | |||||||||
Interaction | WBInteraction000228436 | ||||||||
WBInteraction000229485 | |||||||||
WBInteraction000258849 | |||||||||
WBInteraction000353512 | |||||||||
WBInteraction000370111 | |||||||||
WBInteraction000398953 | |||||||||
WBInteraction000412788 | |||||||||
WBInteraction000457146 | |||||||||
Map_info | Positive | Positive_clone | C04F12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | I | 3.85514 | |||||||
Method | Gene |