WormBase Tree Display for Gene: WBGene00007287
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| WBGene00007287 | SMap | S_parent | Sequence | C04A11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | gck-4 | Person_evidence | WBPerson1068 | |||||
| Sequence_name | C04A11.3 | ||||||||
| Molecular_name | C04A11.3a | ||||||||
| C04A11.3a.1 | |||||||||
| CE07905 | |||||||||
| C04A11.3b | |||||||||
| CE53136 | |||||||||
| C04A11.3b.1 | |||||||||
| Other_name | tag-334 | ||||||||
| CELE_C04A11.3 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | gck-4 | ||||||||
| DB_info | Database | AceView | gene | XO299 | |||||
| WormQTL | gene | WBGene00007287 | |||||||
| SignaLink | protein | WBGene00007287 | |||||||
| WormFlux | gene | WBGene00007287 | |||||||
| NDB | locus_tag | CELE_C04A11.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007287|UniProtKB=O17566 | |||||||
| family | PTHR48012 | ||||||||
| NCBI | gene | 181488 | |||||||
| RefSeq | protein | NM_077889.5 | |||||||
| NM_001373560.5 | |||||||||
| TrEMBL | UniProtAcc | A0A4V0IKG6 | |||||||
| O17566 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A4V0IKG6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:47 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 21 Jun 2005 09:45:25 | WBPerson2970 | Name_change | CGC_name | tag-334 | ||||
| 3 | 27 Apr 2006 11:26:11 | WBPerson2970 | Name_change | CGC_name | gck-4 | ||||
| 4 | 27 Apr 2006 11:26:11 | WBPerson2970 | Name_change | Other_name | tag-334 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gck | ||||||||
| Allele (64) | |||||||||
| Strain | WBStrain00002676 | ||||||||
| WBStrain00036253 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00003875 | ||||||||
| 00003876 | |||||||||
| 00003877 | |||||||||
| 00003878 | |||||||||
| 00003879 | |||||||||
| 00115462 | |||||||||
| 00115463 | |||||||||
| 00115464 | |||||||||
| 00115465 | |||||||||
| Ortholog (42) | |||||||||
| Paralog (27) | |||||||||
| Structured_description | Automated_description | Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in phosphorylation. Predicted to be located in cytoplasm. Expressed in head and tail. Is an ortholog of human SLK (STE20 like kinase) and STK10 (serine/threonine kinase 10). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C04A11.3a | |||||||
| C04A11.3b | |||||||||
| Corresponding_transcript | C04A11.3a.1 | ||||||||
| C04A11.3b.1 | |||||||||
| Other_sequence (23) | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result (11) | ||||||||
| Expr_pattern | Expr5137 | ||||||||
| Expr1028856 | |||||||||
| Expr1033143 | |||||||||
| Expr1143670 | |||||||||
| Expr2011965 | |||||||||
| Expr2030202 | |||||||||
| Drives_construct | WBCnstr00003218 | ||||||||
| WBCnstr00033858 | |||||||||
| Construct_product | WBCnstr00033858 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (90) | |||||||||
| Interaction (21) | |||||||||
| Map_info | Map | X | Position | 14.1846 | Error | 0.073054 | |||
| Positive | Positive_clone | C04A11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5297 | |||||||
| 4143 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024200 | ||||||||
| WBPaper00027258 | |||||||||
| WBPaper00030648 | |||||||||
| WBPaper00031865 | |||||||||
| WBPaper00034040 | |||||||||
| WBPaper00035598 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061356 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
