WormBase Tree Display for Gene: WBGene00007202
expand all nodes | collapse all nodes | view schema
| WBGene00007202 | SMap | S_parent | Sequence | B0564 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | B0564.2 | |||||||
| Molecular_name | B0564.2a | ||||||||
| B0564.2a.1 | |||||||||
| CE43930 | |||||||||
| B0564.2b | |||||||||
| CE49751 | |||||||||
| B0564.2b.1 | |||||||||
| Other_name | CELE_B0564.2 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | B0564.2 | ||||||||
| DB_info | Database | AceView | gene | 4N875 | |||||
| WormQTL | gene | WBGene00007202 | |||||||
| WormFlux | gene | WBGene00007202 | |||||||
| NDB | locus_tag | CELE_B0564.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007202|UniProtKB=Q17527 | |||||||
| family | PTHR46030 | ||||||||
| NCBI | gene | 182043 | |||||||
| RefSeq | protein | NM_070121.5 | |||||||
| NM_001307083.3 | |||||||||
| TrEMBL | UniProtAcc | A0A061AJK0 | |||||||
| Q17527 | |||||||||
| UniProt_GCRP | UniProtAcc | Q17527 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:47 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (59) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00000365 | ||||||||
| 00000366 | |||||||||
| 00000367 | |||||||||
| 00000368 | |||||||||
| 00000369 | |||||||||
| Contained_in_operon | CEOP4532 | ||||||||
| Ortholog (29) | |||||||||
| Paralog | WBGene00007581 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00016448 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable dioxygenase activity and metal ion binding activity. Predicted to be located in nucleus. Is an ortholog of human ALKBH6 (alkB homolog 6). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | B0564.2a | |||||||
| B0564.2b | |||||||||
| Corresponding_CDS_history | B0564.2:wp204 | ||||||||
| Corresponding_transcript | B0564.2a.1 | ||||||||
| B0564.2b.1 | |||||||||
| Other_sequence (15) | |||||||||
| Associated_feature | WBsf660871 | ||||||||
| WBsf229389 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00039212 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00009867 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076062 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039209 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039211 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012515 | ||||||||
| Expr1033103 | |||||||||
| Expr1143354 | |||||||||
| Expr2000252 | |||||||||
| Expr2018472 | |||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (96) | |||||||||
| SAGE_tag | SAGE:accgacgacgcgtacac | Strand | Sense | ||||||
| Unambiguously_mapped | |||||||||
| SAGE:accgacgacg | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:tcaataaaaa | Strand | Antisense | |||||||
| SAGE:ccccatacagatggtcc | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| Interaction | WBInteraction000303063 | ||||||||
| WBInteraction000428789 | |||||||||
| WBInteraction000550243 | |||||||||
| Map_info | Positive | Positive_clone | B0564 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 8.1615 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00057162 | |||||||||
| WBPaper00062465 | |||||||||
| Method | Gene |
