WormBase Tree Display for Gene: WBGene00007043
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| WBGene00007043 | SMap | S_parent | Sequence | T24D1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | algn-10 | |||||||
| Sequence_name | T24D1.4 | ||||||||
| Molecular_name | T24D1.4 | ||||||||
| T24D1.4.1 | |||||||||
| CE46260 | |||||||||
| Other_name | tag-179 | ||||||||
| CELE_T24D1.4 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | algn-10 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 13:09:06 | WBPerson1845 | Event | Created | |||
| 2 | 05 Oct 2005 17:16:52 | WBPerson2970 | Event | Acquires_merge | WBGene00011987 | ||||
| Name_change | Sequence_name | T24D1.4 | |||||||
| 3 | 12 Nov 2018 16:28:49 | WBPerson1983 | Name_change | CGC_name | algn-10 | ||||
| Other_name | tag-179 | ||||||||
| Acquires_merge | WBGene00011987 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | algn | ||||||||
| Allele (21) | |||||||||
| Strain | WBStrain00035880 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Ortholog (36) | |||||||||
| Structured_description | Automated_description | Predicted to enable dolichyl pyrophosphate Glc2Man9GlcNAc2 alpha-1,2-glucosyltransferase activity. Predicted to be involved in protein N-linked glycosylation. Predicted to be located in endoplasmic reticulum. Human ortholog(s) of this gene implicated in long QT syndrome 2. Is an ortholog of human ALG10 (ALG10 alpha-1,2-glucosyltransferase) and ALG10B (ALG10 alpha-1,2-glucosyltransferase B). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0110645 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:31088) | ||||
| Molecular_info | Corresponding_CDS | T24D1.4 | |||||||
| Corresponding_CDS_history | T24D1.4:wp226 | ||||||||
| Corresponding_transcript | T24D1.4.1 | ||||||||
| Other_sequence | JI481501.1 | ||||||||
| Dviv_isotig25490 | |||||||||
| CRC09685_1 | |||||||||
| JI170120.1 | |||||||||
| CJC14565_1 | |||||||||
| JI461918.1 | |||||||||
| CR12646 | |||||||||
| Associated_feature | WBsf649535 | ||||||||
| WBsf984872 | |||||||||
| WBsf984873 | |||||||||
| WBsf1010462 | |||||||||
| WBsf1010463 | |||||||||
| WBsf220173 | |||||||||
| WBsf220174 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00061371 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00004302 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00116895 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035921 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054047 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022766 | ||||||||
| Expr1033022 | |||||||||
| Expr1157588 | |||||||||
| Expr2017235 | |||||||||
| Expr2035371 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (103) | |||||||||
| Interaction (30) | |||||||||
| Map_info | Map | I | Position | 4.10762 | Error | 0.005335 | |||
| Positive | Positive_clone | T24D1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5544 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00029024 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00045573 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064339 | |||||||||
| Remark | tag-179 is parsed from CGC strain VC569 | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
