WormBase Tree Display for Gene: WBGene00007030
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WBGene00007030 | Evidence | Paper_evidence | WBPaper00013412 | |||||
---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | Y111B2A | |||||
Identity | Version | 1 | ||||||
Name | CGC_name | epc-1 | Person_evidence | WBPerson268 | ||||
Sequence_name | Y111B2A.11 | |||||||
Molecular_name | Y111B2A.11 | |||||||
Y111B2A.11.1 | ||||||||
CE36670 | ||||||||
Y111B2A.11.2 | ||||||||
Other_name | Y111B2G.a | Curator_confirmed | WBPerson1983 | |||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | |||||||
CELE_Y111B2A.11 | Accession_evidence | NDB | BX284603 | |||||
Public_name | epc-1 | |||||||
DB_info | Database | AceView | gene | 3N690 | ||||
WormQTL | gene | WBGene00007030 | ||||||
WormFlux | gene | WBGene00007030 | ||||||
NDB | locus_tag | CELE_Y111B2A.11 | ||||||
Panther | gene | CAEEL|WormBase=WBGene00007030|UniProtKB=G5EC14 | ||||||
family | PTHR14898 | |||||||
NCBI | gene | 176679 | ||||||
RefSeq | protein | NM_001383013.2 | ||||||
TREEFAM | TREEFAM_ID | TF106438 | ||||||
TrEMBL | UniProtAcc | G5EC14 | ||||||
UniProt_GCRP | UniProtAcc | G5EC14 | ||||||
Species | Caenorhabditis elegans | |||||||
History | Version_change | 1 | 21 May 2004 09:40:04 | WBPerson1845 | Event | Created | ||
Status | Live | |||||||
Gene_info | Biotype | SO:0001217 | ||||||
Gene_class | epc | |||||||
Allele (210) | ||||||||
Strain | WBStrain00001844 | |||||||
WBStrain00027411 | ||||||||
RNASeq_FPKM (74) | ||||||||
GO_annotation | 00010721 | |||||||
00010722 | ||||||||
00010723 | ||||||||
00010724 | ||||||||
00010725 | ||||||||
00010726 | ||||||||
00010727 | ||||||||
00010728 | ||||||||
00115242 | ||||||||
00115243 | ||||||||
Contained_in_operon | CEOP3892 | |||||||
Ortholog (41) | ||||||||
Structured_description | Automated_description | Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of Piccolo NuA4 histone acetyltransferase complex. Expressed in tail. Is an ortholog of human EPC1 (enhancer of polycomb homolog 1). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | |||||||
WBPerson37462 | ||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||||
Molecular_info | Corresponding_CDS | Y111B2A.11 | ||||||
Corresponding_CDS_history | Y111B2A.11:wp124 | |||||||
Corresponding_transcript | Y111B2A.11.1 | |||||||
Y111B2A.11.2 | ||||||||
Other_sequence (46) | ||||||||
Associated_feature (17) | ||||||||
Experimental_info | RNAi_result (60) | |||||||
Expr_pattern | Chronogram1779 | |||||||
Expr6884 | ||||||||
Expr1016371 | ||||||||
Expr1033019 | ||||||||
Expr1158873 | ||||||||
Expr2011340 | ||||||||
Expr2029576 | ||||||||
Drives_construct | WBCnstr00002638 | |||||||
Microarray_results (20) | ||||||||
Expression_cluster (120) | ||||||||
Interaction (29) | ||||||||
Map_info | Map | III | Position | 18.0007 | Error | 0.012685 | ||
Positive | Positive_clone | Y111B2A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Mapping_data | Multi_point | 4921 | ||||||
Pseudo_map_position | ||||||||
Reference (12) | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |