WormBase Tree Display for Gene: WBGene00006902
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WBGene00006902 | SMap | S_parent | Sequence | CHROMOSOME_I | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | vet | |||||
Allele (47) | ||||||
Legacy_information | [C.elegansII] NMK. Abundant pre-gastrulation transcript. Encodes novel protein. vet-6:lacZ expressed in many cells from 28-cell stage to end of gastrulation. [Schauer and Wood 1990; BW] | |||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00016400 | |||||
00016401 | ||||||
00016402 | ||||||
00114979 | ||||||
Ortholog (25) | ||||||
Paralog (12) | ||||||
Structured_description | Concise_description | vet-6 encodes a protein that contains a spectrin repeat; vet-6 is preferentially transcribed in embryos prior to gastrulation. | Paper_evidence | WBPaper00002526 | ||
WBPaper00002567 | ||||||
WBPaper00014776 | ||||||
Curator_confirmed | WBPerson48 | |||||
Date_last_updated | 10 Jan 2005 00:00:00 | |||||
Automated_description | Involved in gastrulation. Located in cytoplasm. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | F44F1.7 | ||||
Corresponding_transcript | F44F1.7.1 | |||||
Other_sequence | FG620562.1 | |||||
Associated_feature | WBsf643794 | |||||
WBsf985809 | ||||||
WBsf218706 | ||||||
Experimental_info | RNAi_result | WBRNAi00014950 | Inferred_automatically | RNAi_primary | ||
WBRNAi00093883 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00047314 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00093938 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00032254 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00093954 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1021307 | |||||
Expr1032926 | ||||||
Expr1151166 | ||||||
Expr2017972 | ||||||
Expr2036108 | ||||||
Drives_construct | WBCnstr00034105 | |||||
Construct_product | WBCnstr00018445 | |||||
WBCnstr00034105 | ||||||
Microarray_results (18) | ||||||
Expression_cluster (193) | ||||||
Interaction (61) | ||||||
Map_info (4) | ||||||
Reference | WBPaper00002526 | |||||
WBPaper00002567 | ||||||
WBPaper00014776 | ||||||
WBPaper00015183 | ||||||
WBPaper00032509 | ||||||
WBPaper00038341 | ||||||
WBPaper00056814 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |