WormBase Tree Display for Gene: WBGene00006738
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| WBGene00006738 | Evidence | Person_evidence | WBPerson2549 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| WBPerson6733 | |||||||||
| SMap | S_parent | Sequence | Y48A5A | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | ulp-3 | |||||||
| Sequence_name | Y48A5A.2 | ||||||||
| Molecular_name | Y48A5A.2 | ||||||||
| Y48A5A.2.1 | |||||||||
| CE33875 | |||||||||
| Other_name | CELE_Y48A5A.2 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | ulp-3 | ||||||||
| DB_info | Database | AceView | gene | 4C729 | |||||
| WormQTL | gene | WBGene00006738 | |||||||
| WormFlux | gene | WBGene00006738 | |||||||
| NDB | locus_tag | CELE_Y48A5A.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00006738|UniProtKB=Q86FN3 | |||||||
| family | PTHR46468 | ||||||||
| NCBI | gene | 3565434 | |||||||
| RefSeq | protein | NM_001028306.3 | |||||||
| TREEFAM | TREEFAM_ID | TF351057 | |||||||
| TrEMBL | UniProtAcc | Q86FN3 | |||||||
| UniProt_GCRP | UniProtAcc | Q86FN3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:41 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ulp | ||||||||
| Allele (23) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00083256 | ||||||||
| 00083257 | |||||||||
| 00083258 | |||||||||
| 00083259 | |||||||||
| 00114712 | |||||||||
| 00114713 | |||||||||
| 00114714 | |||||||||
| Contained_in_operon | CEOP4052 | ||||||||
| Ortholog (18) | |||||||||
| Paralog | WBGene00019399 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Predicted to enable deNEDDylase activity. Predicted to be involved in proteolysis. Is an ortholog of human SENP8 (SUMO peptidase family member, NEDD8 specific). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y48A5A.2 | |||||||
| Corresponding_transcript | Y48A5A.2.1 | ||||||||
| Associated_feature | WBsf995594 | ||||||||
| WBsf1016833 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00076798 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00020720 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025081 | ||||||||
| Expr1032813 | |||||||||
| Expr1160307 | |||||||||
| Expr2017828 | |||||||||
| Expr2035964 | |||||||||
| Antibody | WBAntibody00002879 | ||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (61) | |||||||||
| Interaction (31) | |||||||||
| Map_info | Map | IV | Position | -12.6365 | Error | 0.159522 | |||
| Positive | Positive_clone | Y48A5A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00038669 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00058667 | |||||||||
| WBPaper00065218 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
