WormBase Tree Display for Gene: WBGene00006716
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WBGene00006716 | SMap | S_parent | Sequence | C06E2 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | ubc-21 | Person_evidence | WBPerson89 | |||||
Sequence_name | C06E2.3 | ||||||||
Molecular_name | C06E2.3 | ||||||||
C06E2.3.1 | |||||||||
CE46306 | |||||||||
Other_name | CELE_C06E2.3 | Accession_evidence | NDB | BX284606 | |||||
Public_name | ubc-21 | ||||||||
DB_info | Database (12) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:41 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ubc | ||||||||
Allele (57) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (12) | |||||||||
Ortholog (28) | |||||||||
Paralog (19) | |||||||||
Structured_description | Automated_description | Predicted to enable ubiquitin conjugating enzyme activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process and protein polyubiquitination. Predicted to be located in nucleus. Is an ortholog of human UBE2K (ubiquitin conjugating enzyme E2 K). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C06E2.3 | |||||||
Corresponding_CDS_history | C06E2.3:wp156 | ||||||||
C06E2.3:wp226 | |||||||||
Corresponding_transcript | C06E2.3.1 | ||||||||
Other_sequence | XI02873 | ||||||||
TMC01704_1 | |||||||||
TSC09095_1 | |||||||||
TM01958 | |||||||||
Acan_isotig14656 | |||||||||
PSC00018_1 | |||||||||
GW407764.1 | |||||||||
EX501779.1 | |||||||||
GO253094.1 | |||||||||
Associated_feature | WBsf663061 | ||||||||
Experimental_info | RNAi_result | WBRNAi00082814 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00039901 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00076091 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00094642 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00070685 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00070686 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00010310 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1013013 | ||||||||
Expr1143978 | |||||||||
Drives_construct | WBCnstr00034198 | ||||||||
Construct_product | WBCnstr00034198 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (42) | |||||||||
Interaction (48) | |||||||||
Map_info | Map | X | Position | 0.431772 | Error | 0.002513 | |||
Positive | Positive_clone | C06E2 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00005337 | ||||||||
WBPaper00027315 | |||||||||
WBPaper00033175 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00064325 | |||||||||
Remark | Sequence connection from [Jones D, Crowe E, Stevens TA, Candido EPM], 02/06/10 krb. | ||||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |