WormBase Tree Display for Gene: WBGene00006711
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| WBGene00006711 | SMap | S_parent | Sequence | Y54E5B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | ubc-16 | Person_evidence | WBPerson89 | |||||
| Sequence_name | Y54E5B.4 | ||||||||
| Molecular_name | Y54E5B.4 | ||||||||
| Y54E5B.4.1 | |||||||||
| CE19228 | |||||||||
| Other_name | CELE_Y54E5B.4 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | ubc-16 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:41 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ubc | ||||||||
| Allele (54) | |||||||||
| Strain | WBStrain00033017 | ||||||||
| WBStrain00037301 | |||||||||
| WBStrain00033016 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00103471 | ||||||||
| 00103472 | |||||||||
| 00103473 | |||||||||
| 00103474 | |||||||||
| 00103475 | |||||||||
| 00103476 | |||||||||
| 00103477 | |||||||||
| 00103478 | |||||||||
| 00103479 | |||||||||
| Contained_in_operon | CEOP1768 | ||||||||
| Ortholog (34) | |||||||||
| Paralog (18) | |||||||||
| Structured_description | Automated_description | Predicted to enable ubiquitin conjugating enzyme activity. Involved in protein ubiquitination. Predicted to be located in nucleus. Expressed in germ line and oocyte. Is an ortholog of human UBE2W (ubiquitin conjugating enzyme E2 W). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y54E5B.4 | |||||||
| Corresponding_transcript | Y54E5B.4.1 | ||||||||
| Other_sequence (43) | |||||||||
| Associated_feature | WBsf218837 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00082827 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00076822 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00094717 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057391 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037481 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004747 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00116883 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00082838 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9710 | ||||||||
| Expr1018643 | |||||||||
| Expr1032794 | |||||||||
| Expr1160825 | |||||||||
| Expr2017702 | |||||||||
| Expr2035840 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (64) | |||||||||
| Interaction | WBInteraction000216221 | ||||||||
| WBInteraction000437820 | |||||||||
| WBInteraction000505044 | |||||||||
| WBInteraction000517536 | |||||||||
| WBInteraction000517537 | |||||||||
| WBInteraction000551273 | |||||||||
| WBInteraction000555278 | |||||||||
| WBInteraction000555279 | |||||||||
| Map_info | Map | I | Position | 27.9197 | Error | 0.003529 | |||
| Positive | Positive_clone | Y54E5B | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005337 | ||||||||
| WBPaper00027315 | |||||||||
| WBPaper00030888 | |||||||||
| WBPaper00032230 | |||||||||
| WBPaper00033175 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056873 | |||||||||
| WBPaper00064339 | |||||||||
| Remark | Sequence connection from [Jones D, Crowe E, Stevens TA, Candido EPM], 02/06/10 krb. | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
