WormBase Tree Display for Gene: WBGene00006630
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WBGene00006630 | SMap | S_parent | Sequence | F53B2 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | tsp-4 | Person_evidence | WBPerson522 | |||||
Sequence_name | F53B2.2 | ||||||||
Molecular_name | F53B2.2 | ||||||||
F53B2.2.1 | |||||||||
CE44254 | |||||||||
Other_name | CELE_F53B2.2 | Accession_evidence | NDB | BX284604 | |||||
Public_name | tsp-4 | ||||||||
DB_info | Database | AceView | gene | 4N280 | |||||
WormQTL | gene | WBGene00006630 | |||||||
WormFlux | gene | WBGene00006630 | |||||||
NDB | locus_tag | CELE_F53B2.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00006630|UniProtKB=Q20707 | |||||||
family | PTHR19282 | ||||||||
NCBI | gene | 192060 | |||||||
RefSeq | protein | NM_069995.4 | |||||||
TREEFAM | TREEFAM_ID | TF352897 | |||||||
TrEMBL | UniProtAcc | Q20707 | |||||||
UniProt_GCRP | UniProtAcc | Q20707 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:41 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | tsp | ||||||||
Allele (17) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00068834 | ||||||||
00068835 | |||||||||
00068836 | |||||||||
00114521 | |||||||||
Ortholog (37) | |||||||||
Paralog (20) | |||||||||
Structured_description | Automated_description | Predicted to be located in membrane. Is an ortholog of several human genes including TSPAN1 (tetraspanin 1); TSPAN2 (tetraspanin 2); and TSPAN4 (tetraspanin 4). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F53B2.2 | |||||||
Corresponding_CDS_history | F53B2.2:wp29 | ||||||||
F53B2.2:wp208 | |||||||||
Corresponding_transcript | F53B2.2.1 | ||||||||
Associated_feature | WBsf231032 | ||||||||
Experimental_info | RNAi_result | WBRNAi00102082 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00020590 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00032668 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00048076 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00056577 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1027948 | ||||||||
Expr1151886 | |||||||||
Expr2017554 | |||||||||
Expr2035692 | |||||||||
Drives_construct | WBCnstr00034254 | ||||||||
Construct_product | WBCnstr00034254 | ||||||||
Microarray_results (17) | |||||||||
Expression_cluster (93) | |||||||||
Interaction (21) | |||||||||
Map_info | Map | IV | Position | 6.00271 | Error | 0.001628 | |||
Positive | Positive_clone | F53B2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |